RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 TIMM10BQ9Y5J6 103 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 FER1L5A0AVI2 2057 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 GVINP1Q7Z2Y8 2422 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 SCRG1O75711 98 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 SERPINA2P20848 420 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 ZNF121P58317 390 aaPredicted RBP9.4□□□□□ -0.9
CDH1-214ENST00000621016 C17orf67Q0P5P2 114 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 DNM1P34Q6PK57 102 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 UEVLDQ8IX04 471 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 BEND2Q8NDZ0 799 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 ASB10Q8WXI3 467 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 GNRHR2Q96P88 292 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 TAAR9Q96RI9 348 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 ALKBH7Q9BT30 221 aaPredicted RBP9.4□□□□□ -0.9
CDH1-214ENST00000621016 NELFAQ9H3P2 528 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 C1orf198Q9H425 327 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 CHST11Q9NPF2 352 aa9.4□□□□□ -0.9
CDH1-214ENST00000621016 TRAV34A0A0B4J273 112 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 BLACEA4D250 179 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 AQP7P3A6NL99 342 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 FGF16O43320 207 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 NPIPB7O75200 414 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 TSPAN15O95858 294 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 ITGB2P05107 769 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 ZNF43P17038 809 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 GZMHP20718 246 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 TUBG1P23258 451 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 DAP3P51398 398 aaKnown RBP9.39□□□□□ -0.91
CDH1-214ENST00000621016 ERVFRD-1P60508 538 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 ROM1Q03395 351 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 PDCD1Q15116 288 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 LCN10Q6JVE6 187 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 GUSBP11Q6P575 273 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 PAQR4Q8N4S7 273 aaPredicted RBP9.39□□□□□ -0.91
CDH1-214ENST00000621016 ST6GALNAC3Q8NDV1 305 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 PIGTQ969N2 578 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 DDIT4LQ96D03 193 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 RBM24Q9BX46 236 aaKnown RBP9.39□□□□□ -0.91
CDH1-214ENST00000621016 SLC25A31Q9H0C2 315 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 KCNJ16Q9NPI9 418 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 RHBDD3Q9Y3P4 386 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 KPTNQ9Y664 436 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 FAM157CP0CG43 387 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 GUCA1AP43080 201 aaPredicted RBP9.39□□□□□ -0.91
CDH1-214ENST00000621016 CDKN1BP46527 198 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 OR3A2P47893 321 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 RAB7AP51149 207 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 SLC35E3Q7Z769 313 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 KMT5CQ86Y97 462 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 RNF2Q99496 336 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 MRPS28Q9Y2Q9 187 aaKnown RBP9.39□□□□□ -0.91
CDH1-214ENST00000621016 FAM221AA4D161 298 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 MEGF11A6BM72 1044 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 METTL15P1P0C7V9 234 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 GABRR1P24046 479 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 CHRNB4P30926 498 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 CLDN17P56750 224 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 SOX8P57073 446 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 JOSD1Q15040 202 aaPredicted RBP9.39□□□□□ -0.91
CDH1-214ENST00000621016 RPL7L1Q6DKI1 246 aaKnown RBP9.39□□□□□ -0.91
CDH1-214ENST00000621016 OR4K17Q8NGC6 315 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 ZNF501Q96CX3 271 aaPredicted RBP9.39□□□□□ -0.91
CDH1-214ENST00000621016 ARHGAP5-AS1Q96IT6 56 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 PHB2Q99623 299 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 SLC25A21Q9BQT8 299 aaPredicted RBP9.39□□□□□ -0.91
CDH1-214ENST00000621016 RNF150Q9ULK6 438 aa9.39□□□□□ -0.91
CDH1-214ENST00000621016 FTCDNL1E5RQL4 147 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 MFNGO00587 321 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 AMBPP02760 352 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 PATE4P0C8F1 98 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 MPZP25189 248 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 NXPH1P58417 271 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 COMMD1Q8N668 190 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 TMEM229BQ8NBD8 167 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 OR51T1Q8NGJ9 327 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 OR10S1Q8NGN2 331 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 OR1J1Q8NGS3 322 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 DEFB126Q9BYW3 111 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 MYOTQ9UBF9 498 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 ZNF878C9JN71 531 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 DBHP09172 617 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 ZNF735P0CB33 412 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 CEACAM1P13688 526 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 CLDN6P56747 220 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 IL34Q6ZMJ4 242 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 C1QL2Q7Z5L3 287 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 SLC22A24Q8N4F4 322 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 GALNT14Q96FL9 552 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 KCNK17Q96T54 332 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 ZNF430Q9H8G1 570 aaPredicted RBP9.38□□□□□ -0.91
CDH1-214ENST00000621016 RAB22AQ9UL26 194 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 RCL1Q9Y2P8 373 aaKnown RBP9.38□□□□□ -0.91
CDH1-214ENST00000621016 SLC33A1O00400 549 aaPredicted RBP9.38□□□□□ -0.91
CDH1-214ENST00000621016 SCGB1D2O95969 90 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 PNLIPP16233 465 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 FAHP16930 419 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 AMY2BP19961 511 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 GLRA1P23415 457 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 BRS3P32247 399 aa9.38□□□□□ -0.91
CDH1-214ENST00000621016 MIDNQ504T8 468 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms