RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 PCGF1Q9BSM1 259 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 DCTN5Q9BTE1 182 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 MS4A7Q9GZW8 240 aaPredicted RBP4.99□□□□□ -1.61
SSX4B-202ENST00000619890 FAM234AQ9H0X4 552 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 WDR13Q9H1Z4 485 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 RHOFQ9HBH0 211 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 HES4Q9HCC6 221 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 FGF20Q9NP95 211 aaPredicted RBP4.99□□□□□ -1.61
SSX4B-202ENST00000619890 CHCHD3Q9NX63 227 aaKnown RBP4.99□□□□□ -1.61
SSX4B-202ENST00000619890 ERVK13-1Q9NX77 482 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 CNOT2Q9NZN8 540 aaKnown RBP4.99□□□□□ -1.61
SSX4B-202ENST00000619890 ZNF222Q9UK12 451 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 DIMT1Q9UNQ2 313 aaKnown RBP4.99□□□□□ -1.61
SSX4B-202ENST00000619890 MYRFQ9Y2G1 1151 aa4.99□□□□□ -1.61
SSX4B-202ENST00000619890 CAB39Q9Y376 341 aaPredicted RBP4.99□□□□□ -1.61
SSX4B-202ENST00000619890 EXOSC1Q9Y3B2 195 aaKnown RBP4.99□□□□□ -1.61
SSX4B-202ENST00000619890 RYR1P21817 5038 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 SACSQ9NZJ4 4579 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 IGKV1D-17A0A075B6S4 117 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 hCG_1809904A0A1W2PP81 198 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 A0A1W2PPE2 198 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 FAM230AA0A1W2PPH8 454 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 A0A1W2PQ09 198 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 A0A1W2PR64 198 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 A0A1W2PRV1 198 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 EFCAB10A6NFE3 127 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 CCDC160A6NGH7 325 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 OR4C45A6NMZ5 311 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 CLDN34H7C241 214 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 M0R1W7 72 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 SYNGR1O43759 233 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 LIMS3P0CW19 117 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 LIMS4P0CW20 117 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 IGHV4-38-2P0DP08 117 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 ATF1P18846 271 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 AZGP1P25311 298 aaKnown RBP4.98□□□□□ -1.61
SSX4B-202ENST00000619890 GABRA2P47869 451 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 TAS2R43P59537 309 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 GMFBP60983 142 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 ERVK11-1P61568 191 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 LSAMPQ13449 338 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 CDK5R1Q15078 307 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 UBE2V2Q15819 145 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 DGUOKQ16854 277 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 SPIN3Q5JUX0 258 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 VAX1Q5SQQ9 334 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 NCR3LG1Q68D85 454 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 RPL22L1Q6P5R6 122 aaKnown RBP4.98□□□□□ -1.61
SSX4B-202ENST00000619890 C1orf122Q6ZSJ8 110 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 LHFPL3Q86UP9 236 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 CALHM1Q8IU99 346 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 SERPINA12Q8IW75 414 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 MKXQ8IYA7 352 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 PARP16Q8N5Y8 322 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 TMEM86BQ8N661 226 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 TMEM185AQ8NFB2 350 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 TSPAN14Q8NG11 270 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 OR5D14Q8NGL3 314 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 OR52N1Q8NH53 320 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 OR5AK2Q8NH90 309 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 CNIH3Q8TBE1 160 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 TRMT10AQ8TBZ6 339 aaKnown RBP4.98□□□□□ -1.61
SSX4B-202ENST00000619890 RPS4Y2Q8TD47 263 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 NPRL2Q8WTW4 380 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 TSEN15Q8WW01 171 aaKnown RBP4.98□□□□□ -1.61
SSX4B-202ENST00000619890 H1FXQ92522 213 aaKnown RBP4.98□□□□□ -1.61
SSX4B-202ENST00000619890 THRSPQ92748 146 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 SMIM19Q96E16 107 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 OPALINQ96PE5 141 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 TBX15Q96SF7 602 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 SIRPDQ9H106 197 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 METTL8Q9H825 291 aaKnown RBP4.98□□□□□ -1.61
SSX4B-202ENST00000619890 CNTD2Q9H8S5 307 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 UNKLQ9H9P5 680 aaKnown RBP4.98□□□□□ -1.61
SSX4B-202ENST00000619890 SEBOXQ9HB31 216 aaPredicted RBP4.98□□□□□ -1.61
SSX4B-202ENST00000619890 AMBNQ9NP70 447 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 NOX4Q9NPH5 578 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 SNTG1Q9NSN8 517 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 PTTG2Q9NZH5 202 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 ONECUT1Q9UBC0 465 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 ZNF69Q9UC07 566 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 DHDHQ9UQ10 334 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 PCDHGB5Q9Y5G0 923 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 COL7A1Q02388 2944 aa4.98□□□□□ -1.61
SSX4B-202ENST00000619890 ARHGAP32A7KAX9 2087 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 IGHV1-69DA0A0B4J2H0 117 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 TRBV2A0A0J9YWF9 115 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 A0A1B0GW55 424 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 DNAJC9-AS1A6NH13 148 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 A6NIN4 97 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 RFPL4AA6NLU0 287 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 RFPL4AL1F8VTS6 287 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 H3BSH0 61 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 MYL12BO14950 172 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 MAGEB3O15480 346 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 SULT1B1O43704 296 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 FCN3O75636 299 aa4.97□□□□□ -1.61
SSX4B-202ENST00000619890 ZFPL1O95159 310 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms