RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 MPV17LQ2QL34 196 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 C2orf76Q3KRA6 126 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 AVPI1Q5T686 147 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 ZNF788Q6ZQV5 615 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 ZNF561Q8N587 486 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 RAB39BQ96DA2 213 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 C1orf159Q96HA4 380 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 GAL3ST1Q99999 423 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 ZNF665Q9H7R5 613 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 RSL24D1Q9UHA3 163 aaKnown RBP13.2□□□□□ -0.3
MALAT1-213ENST00000618227 RAB22AQ9UL26 194 aa13.2□□□□□ -0.3
MALAT1-213ENST00000618227 PRRC2AP48634 2157 aaKnown RBP13.2□□□□□ -0.3
MALAT1-213ENST00000618227 ISPDA4D126 451 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 DPPA5A6NC42 116 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 NKX6-3A6NJ46 265 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 RFPL4AA6NLU0 287 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 CEACAM18A8MTB9 384 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 RFPL4AL1F8VTS6 287 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 SIGLEC5O15389 551 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 WNT2P09544 360 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 MGMTP16455 207 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 NPY4RP50391 375 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 RBM11P57052 281 aaKnown RBP13.19□□□□□ -0.3
MALAT1-213ENST00000618227 LMO4P61968 165 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 P2RY14Q15391 338 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 HES5Q5TA89 166 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 NLRC3Q7RTR2 1065 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 DEFB108BQ8NET1 73 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 WFDC11Q8NEX6 87 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 OR51D1Q8NGF3 324 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 CLDND2Q8NHS1 167 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 ACOT12Q8WYK0 555 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 NEIL1Q96FI4 390 aaPredicted RBP13.19□□□□□ -0.3
MALAT1-213ENST00000618227 TM2D1Q9BX74 207 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 FAM234AQ9H0X4 552 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 LIN7BQ9HAP6 207 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 SPACA1Q9HBV2 294 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 DAPK2Q9UIK4 370 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 PCDHB10Q9UN67 800 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 ETV7Q9Y603 341 aa13.19□□□□□ -0.3
MALAT1-213ENST00000618227 IGHV4-61A0A0C4DH41 118 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 CRTAPO75718 401 aaPredicted RBP13.18□□□□□ -0.3
MALAT1-213ENST00000618227 ZNF205O95201 554 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 HAND1O96004 215 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 IGHV2-5P01817 119 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 GYPAP02724 150 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 GLAP06280 429 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 AMY2BP19961 511 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 SERPINA2P20848 420 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 RPS27AP62979 156 aaKnown RBP13.18□□□□□ -0.3
MALAT1-213ENST00000618227 IL13RA1P78552 427 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 SPCS2Q15005 226 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 Q6P435 159 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 FAM89BQ8N5H3 189 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 TMEM104Q8NE00 496 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 OR10K1Q8NGX5 313 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 NDNFQ8TB73 568 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 AP3S1Q92572 193 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 SEH1LQ96EE3 360 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 Q96M66 194 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 NKX3-1Q99801 234 aaPredicted RBP13.18□□□□□ -0.3
MALAT1-213ENST00000618227 URM1Q9BTM9 101 aaKnown RBP13.18□□□□□ -0.3
MALAT1-213ENST00000618227 TMEM59Q9BXS4 323 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 ST3GAL6Q9Y274 331 aa13.18□□□□□ -0.3
MALAT1-213ENST00000618227 IGHV3OR15-7A0A075B7D8 119 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 ADAM20O43506 726 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 SLC2A2P11168 524 aaPredicted RBP13.17□□□□□ -0.3
MALAT1-213ENST00000618227 RPS2P15880 293 aaKnown RBP13.17□□□□□ -0.3
MALAT1-213ENST00000618227 ZNF182P17025 639 aaPredicted RBP13.17□□□□□ -0.3
MALAT1-213ENST00000618227 SOX6P35712 828 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 CAV3P56539 151 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 GMFBP60983 142 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 HOXA4Q00056 320 aaPredicted RBP13.17□□□□□ -0.3
MALAT1-213ENST00000618227 HNRNPA0Q13151 305 aaKnown RBP13.17□□□□□ -0.3
MALAT1-213ENST00000618227 UNC119Q13432 240 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 IDNKQ5T6J7 187 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 CD177Q8N6Q3 437 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 C19orf18Q8NEA5 215 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 OR5D13Q8NGL4 314 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 PPP1R35Q8TAP8 253 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 DYNC2LI1Q8TCX1 351 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 SNX22Q96L94 193 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 DMRTB1Q96MA1 342 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 CMTM3Q96MX0 182 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 GAFA1Q96PS6 74 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 BARHL1Q9BZE3 327 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 CCDC59Q9P031 241 aaKnown RBP13.17□□□□□ -0.3
MALAT1-213ENST00000618227 OR5V1Q9UGF6 321 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 ITGB1BP2Q9UKP3 347 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 SPATA2Q9UM82 520 aa13.17□□□□□ -0.3
MALAT1-213ENST00000618227 POLR3KQ9Y2Y1 108 aaPredicted RBP13.17□□□□□ -0.3
MALAT1-213ENST00000618227 CCDC168Q8NDH2 2452 aa13.16□□□□□ -0.3
MALAT1-213ENST00000618227 TMEM272A0A1B0GTI8 110 aa13.16□□□□□ -0.3
MALAT1-213ENST00000618227 CCDC160A6NGH7 325 aa13.16□□□□□ -0.3
MALAT1-213ENST00000618227 A6NHS1 94 aa13.16□□□□□ -0.3
MALAT1-213ENST00000618227 A8MXK9 166 aa13.16□□□□□ -0.3
MALAT1-213ENST00000618227 K7N7A8 449 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms