RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 POC1BQ8TC44 478 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 SFT2D1Q8WV19 159 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 CDX2Q99626 313 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 HDHD3Q9BSH5 251 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 RHOFQ9HBH0 211 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 WASF3Q9UPY6 502 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 FNDC1Q4ZHG4 1894 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZSWIM8A7E2V4 1837 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 ANAPC1Q9H1A4 1944 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 SHOXO15266 292 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 SSX5O60225 188 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 SPINK2P20155 84 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF345Q14585 488 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR2T2Q6IF00 324 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 MRPL24Q96A35 216 aaKnown RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 CLDN23Q96B33 292 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF837Q96EG3 531 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 ARRDC1-AS1Q9H2J1 176 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 SLC2A8Q9NY64 477 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 KPTNQ9Y664 436 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 CHCHD2Q9Y6H1 151 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 IGKV1-9A0A0C4DH69 117 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 GEMIN2O14893 280 aaKnown RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZP3P21754 424 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 RPL23AP62750 156 aaKnown RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 PPIAP62937 165 aaKnown RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF273Q14593 569 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 RSPO4Q2I0M5 234 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 SPINK14Q6IE38 97 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 SAT2Q96F10 170 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 FAM173AQ9BQD7 235 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 TMEM38BQ9NVV0 291 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 PLXNA3P51805 1871 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 TMEM265A0A087WTH1 108 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 ADAM10O14672 748 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 H2AFB1P0C5Y9 115 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 CCL2P13500 99 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 IGFBP3P17936 291 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 GNG3P63215 75 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 LY6G6FQ5SQ64 297 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR10Z1Q8NGY1 313 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 AQP3Q92482 292 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 NKX6-2Q9C056 277 aaPredicted RBP4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 DEFB127Q9H1M4 99 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 SLC26A1Q9H2B4 701 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 PRDM6Q9NQX0 595 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 UFSP2Q9NUQ7 469 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 TMED3Q9Y3Q3 217 aa4.93□□□□□ -1.62
SYNCRIP-204ENST00000616122 KLF7O75840 302 aaPredicted RBP4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 ATG12O94817 140 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 NAAAQ02083 359 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 RGS7BPQ6MZT1 257 aaPredicted RBP4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 ADPRHL1Q8NDY3 354 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 SMCO4Q9NRQ5 59 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 SEMA5BQ9P283 1151 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 TRPM7Q96QT4 1865 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 MT-CO3P00414 261 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 NAT2P11245 290 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 HLA-GP17693 338 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 ACKR3P25106 362 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 GCH1P30793 250 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 RPS10P46783 165 aaKnown RBP4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 P2RY4P51582 365 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 MLF1P58340 268 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 EIF3IQ13347 325 aaKnown RBP4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR1C1Q15619 314 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 PLAC9Q5JTB6 97 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 DCAF10Q5QP82 559 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 CLRN3Q8NCR9 226 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 ADAD2Q8NCV1 583 aaKnown RBP4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR14K1Q8NGZ2 314 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 C5orf66Q9H5L9 145 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 PLEKHF2Q9H8W4 249 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 LOC101059948A0A1B0GTJ6 334 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 MSGN1A6NI15 193 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 ARGFXA6NJG6 315 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 B4E171 279 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 NME2P1O60361 137 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 PPYP01298 95 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 HPNP05981 417 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR5AC1P0C628 307 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 TSPAN7P41732 249 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 PSG4Q00888 419 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 SPATA46Q5T0L3 261 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF573Q86YE8 665 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR2C3Q8N628 320 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 SLC30A7Q8NEW0 376 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR2G3Q8NGZ4 309 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 C10orf35Q96D05 121 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 PECRQ9BY49 303 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 UQCC1Q9NVA1 299 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 LPAR3Q9UBY5 353 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 POLDIP2Q9Y2S7 368 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 MYLKQ15746 1914 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 COL4A6Q14031 1691 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 RAB19A4D1S5 217 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 HS3ST1O14792 307 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 CD8AP01732 235 aa4.92□□□□□ -1.62
SYNCRIP-204ENST00000616122 HEXAP06865 529 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms