RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 CST4P01036 141 aa12.73□□□□□ -0.37
CDKN1A-208ENST00000615513 CD46P15529 392 aa12.73□□□□□ -0.37
CDKN1A-208ENST00000615513 C9orf135Q5VTT2 229 aa12.73□□□□□ -0.37
CDKN1A-208ENST00000615513 MRPL21Q7Z2W9 205 aaKnown RBP12.73□□□□□ -0.37
CDKN1A-208ENST00000615513 DPPA2Q7Z7J5 298 aa12.73□□□□□ -0.37
CDKN1A-208ENST00000615513 CALHM1Q8IU99 346 aa12.73□□□□□ -0.37
CDKN1A-208ENST00000615513 IL22RA1Q8N6P7 574 aa12.73□□□□□ -0.37
CDKN1A-208ENST00000615513 SLC30A7Q8NEW0 376 aa12.73□□□□□ -0.37
CDKN1A-208ENST00000615513 RRNAD1Q96FB5 475 aaKnown RBP12.73□□□□□ -0.37
CDKN1A-208ENST00000615513 HOXB5P09067 269 aa12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 FOXG1P55316 489 aaPredicted RBP12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 RAB32Q13637 225 aa12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 RBM39Q14498 530 aaKnown RBP12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 ELP2Q6IA86 826 aa12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 SLC25A26Q70HW3 274 aa12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 TMEM200AQ86VY9 491 aa12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 GALNT14Q96FL9 552 aa12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 PAPOLGQ9BWT3 736 aaKnown RBP12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 LIME1Q9H400 295 aa12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 KCNIP3Q9Y2W7 256 aa12.72□□□□□ -0.37
CDKN1A-208ENST00000615513 APOC3P02656 99 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 ZNF728P0DKX0 622 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 CCNOP22674 350 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 UCP3P55916 312 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 RAB1AP62820 205 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 PLP2Q04941 152 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 PRDX4Q13162 271 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 CEACAM21Q3KPI0 293 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 UNQ6126/PRO20091Q6UXV3 157 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 BAP18Q8IXM2 172 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 POM121L2Q96KW2 1035 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 CYTL1Q9NRR1 136 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.37
CDKN1A-208ENST00000615513 IFNA21P01568 189 aa12.71□□□□□ -0.38
CDKN1A-208ENST00000615513 CD79AP11912 226 aa12.71□□□□□ -0.38
CDKN1A-208ENST00000615513 PIGPP57054 158 aa12.71□□□□□ -0.38
CDKN1A-208ENST00000615513 SRSF7Q16629 238 aaKnown RBP eCLIP12.71□□□□□ -0.386e-9■■■□□ 16.2
CDKN1A-208ENST00000615513 SLC22A25Q6T423 547 aa12.71□□□□□ -0.38
CDKN1A-208ENST00000615513 NUFIP2Q7Z417 695 aaKnown RBP12.71□□□□□ -0.38
CDKN1A-208ENST00000615513 ZDHHC23Q8IYP9 409 aa12.71□□□□□ -0.38
CDKN1A-208ENST00000615513 NAXEQ8NCW5 288 aa12.71□□□□□ -0.38
CDKN1A-208ENST00000615513 GP6Q9HCN6 339 aa12.71□□□□□ -0.38
CDKN1A-208ENST00000615513 TUBD1Q9UJT1 453 aa12.71□□□□□ -0.38
CDKN1A-208ENST00000615513 WDFY4Q6ZS81 3184 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 ZNF503-AS2A6NEH8 195 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 FGF16O43320 207 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 KCNAB3O43448 404 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 SOX8P57073 446 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 DAZAP2Q15038 168 aaPredicted RBP12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 IAH1Q2TAA2 248 aaPredicted RBP12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 ATRAIDQ6UW56 229 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 Q6ZS49 121 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 HPSE2Q8WWQ2 592 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 DYRK2Q92630 601 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 MARS2Q96GW9 593 aaKnown RBP12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 ZNF442Q9H7R0 627 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 NAA60Q9H7X0 242 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 GSKIPQ9P0R6 139 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 STARD10Q9Y365 291 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 MSGN1A6NI15 193 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 OR7C1O76099 320 aaPredicted RBP12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 GLP1RP43220 463 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 NPBWR2P48146 333 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 FGF12P61328 243 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 ABCA11PQ4W5N1 156 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 BRICD5Q6PL45 260 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 CCDC36Q8IYA8 594 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 LRTM2Q8N967 370 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 OR5A2Q8NGI9 324 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 TOMM40LQ969M1 308 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 MOB3AQ96BX8 217 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 CNTNAP3BQ96NU0 1288 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 SUCNR1Q9BXA5 334 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 CNTNAP3Q9BZ76 1288 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 PIGMQ9H3S5 423 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 TAS2R3Q9NYW6 316 aa12.7□□□□□ -0.38
CDKN1A-208ENST00000615513 KNTC1P50748 2209 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 NCOR1O75376 2440 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 DNASE2O00115 360 aaPredicted RBP12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 TAAR5O14804 337 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 CCL2P13500 99 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 CD82P27701 267 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 FCGR2CP31995 323 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 BHLHE23Q8NDY6 225 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 RTN4IP1Q8WWV3 396 aaPredicted RBP12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 SYT3Q9BQG1 590 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 SLC5A7Q9GZV3 580 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 FGF23Q9GZV9 251 aaPredicted RBP12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 PLSCR2Q9NRY7 297 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 TMEM100Q9NV29 134 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 LIPGQ9Y5X9 500 aa12.69□□□□□ -0.38
CDKN1A-208ENST00000615513 FAM221AA4D161 298 aa12.68□□□□□ -0.38
CDKN1A-208ENST00000615513 HAAOP46952 286 aa12.68□□□□□ -0.38
CDKN1A-208ENST00000615513 S100A10P60903 97 aa12.68□□□□□ -0.38
CDKN1A-208ENST00000615513 EIF5AP63241 154 aaKnown RBP12.68□□□□□ -0.38
CDKN1A-208ENST00000615513 TMEM187Q14656 261 aa12.68□□□□□ -0.38
CDKN1A-208ENST00000615513 TRIP6Q15654 476 aaKnown RBP12.68□□□□□ -0.38
CDKN1A-208ENST00000615513 C3AR1Q16581 482 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms