RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CDK2AP1O14519 115 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 ADAM10O14672 748 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 GDF9O60383 454 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 ARR3P36575 388 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 RAB5CP51148 216 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 MLF1P58340 268 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 SPATA46Q5T0L3 261 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 OR2A2Q6IF42 318 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 ZNF573Q86YE8 665 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 RBMXL1Q96E39 390 aaKnown RBP7.59□□□□□ -1.2
LIG4-204ENST00000611712 NUDT16L1Q9BRJ7 211 aaKnown RBP7.59□□□□□ -1.2
LIG4-204ENST00000611712 NIPSNAP3BQ9BS92 247 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 OR2H1Q9GZK4 316 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 GPR27Q9NS67 375 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 ZNF319Q9P2F9 582 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 TCFL5Q9UL49 500 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 PPP1R3CQ9UQK1 317 aa7.59□□□□□ -1.2
LIG4-204ENST00000611712 PHF3Q92576 2039 aaKnown RBP7.59□□□□□ -1.2
LIG4-204ENST00000611712 IGHV1-45A0A0A0MS14 117 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 C3orf85A0A1B0GTC6 90 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 DHRS7CA6NNS2 312 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 DFFBO76075 338 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 SERPINA7P05543 415 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 IDH3GP51553 393 aaPredicted RBP7.58□□□□□ -1.2
LIG4-204ENST00000611712 PCOLCEQ15113 449 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 ATRAIDQ6UW56 229 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 LIAT1Q6ZQX7 453 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 FER1L6-AS2Q96M78 137 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 IGLV3-12A0A075B6K2 115 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 ZFP92A6NM28 416 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 SIRPB1O00241 398 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 CLDN1O95832 211 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 DTYMKP23919 212 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 HBG1P69891 147 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 HBG2P69892 147 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 OR2C3Q8N628 320 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 UBALD1Q8TB05 177 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 GNPNAT1Q96EK6 184 aaPredicted RBP7.58□□□□□ -1.2
LIG4-204ENST00000611712 C12orf57Q99622 126 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 FAM173AQ9BQD7 235 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 EDEM2Q9BV94 578 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 PLEKHF2Q9H8W4 249 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 CHCHD2Q9Y6H1 151 aaPredicted RBP7.58□□□□□ -1.2
LIG4-204ENST00000611712 GVINP1Q7Z2Y8 2422 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 MSGN1A6NI15 193 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 FCGR3AP08637 254 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 S100PP25815 95 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 GCH1P30793 250 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 POLR2GP62487 172 aaKnown RBP eCLIP7.58□□□□□ -1.2
LIG4-204ENST00000611712 PSG4Q00888 419 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 SLC10A1Q14973 349 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 LTC4SQ16873 150 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 SEC11CQ9BY50 192 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 GPR35Q9HC97 309 aa7.58□□□□□ -1.2
LIG4-204ENST00000611712 MPTX1A8MV57 137 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 ZNHIT1O43257 154 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 ADAM20O43506 726 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 PPYP01298 95 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 FGF5P12034 268 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 PTGER4P35408 488 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 SSPNQ14714 243 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 OR1C1Q15619 314 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 MSMO1Q15800 293 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 TBC1D28Q2M2D7 210 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 PMS2CLQ68D20 193 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 THNSL2Q86YJ6 484 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 S100PBPQ96BU1 408 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 OR5B12Q96R08 314 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 TLNRD1Q9H1K6 362 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 AMDHD2Q9Y303 409 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 NUP210Q8TEM1 1887 aaPredicted RBP7.57□□□□□ -1.2
LIG4-204ENST00000611712 LDLRAD4O15165 306 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 OR2C1O95371 312 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 ALDH3B1P43353 468 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 ZNF92Q03936 586 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 IL13RA2Q14627 380 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 OR8G2PQ6IF36 304 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 RXFP4Q8TDU9 374 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 FBXO17Q96EF6 278 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 HINT2Q9BX68 163 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 TWSG1Q9GZX9 223 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 STARD10Q9Y365 291 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 GPR179Q6PRD1 2367 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 LTBP2Q14767 1821 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 CEBPZOSA8MTT3 80 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 DNPH1O43598 174 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 IAPPP10997 89 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 MUC1P15941 1255 aaPredicted RBP7.57□□□□□ -1.2
LIG4-204ENST00000611712 ZNF17P17021 662 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 RAB11AP62491 216 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 NKX6-1P78426 367 aaPredicted RBP7.57□□□□□ -1.2
LIG4-204ENST00000611712 ENDOGQ14249 297 aaKnown RBP7.57□□□□□ -1.2
LIG4-204ENST00000611712 LCN15Q6UWW0 184 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 TMEM123Q8N131 208 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 COMMD1Q8N668 190 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 OR1J1Q8NGS3 322 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 OR11L1Q8NGX0 322 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 CT55Q8WUE5 264 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 AQP10Q96PS8 301 aa7.57□□□□□ -1.2
LIG4-204ENST00000611712 TAAR9Q96RI9 348 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms