RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GLB1P16278 677 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 NPBWR2P48146 333 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 ZNF674Q2M3X9 581 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 SMRP1Q8NCR6 262 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 CHST5Q9GZS9 411 aa17.74■□□□□ 0.43
SSBP3-216ENST00000610401 IGKV1-12A0A0C4DH73 117 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 IGKV1D-12P01611 117 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 AADACP22760 399 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 SKA3Q8IX90 412 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 NTNG2Q96CW9 530 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 NAA60Q9H7X0 242 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 E5RGE8 158 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 HSD17B6O14756 317 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 HTR5AP47898 357 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 HERV-K104P61576 105 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 KIAA0141Q14154 515 aaPredicted RBP17.73■□□□□ 0.43
SSBP3-216ENST00000610401 PRR18Q8N4B5 295 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 NECAP2Q9NVZ3 263 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 NSG2Q9Y328 171 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 UBE2J1Q9Y385 318 aaPredicted RBP17.73■□□□□ 0.43
SSBP3-216ENST00000610401 SVILO95425 2214 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 DHHO43323 396 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 LYL1P12980 280 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 CLEC12BQ2HXU8 276 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 SLC23A3Q6PIS1 610 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 TMEM123Q8N131 208 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 OR5L2Q8NGL0 311 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 MR1Q95460 341 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 SPACA9Q96E40 222 aaPredicted RBP17.73■□□□□ 0.43
SSBP3-216ENST00000610401 OCIAD1Q9NX40 245 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 IL36RNQ9UBH0 155 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 GPR179Q6PRD1 2367 aa17.73■□□□□ 0.43
SSBP3-216ENST00000610401 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.72■□□□□ 0.43
SSBP3-216ENST00000610401 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.72■□□□□ 0.43
SSBP3-216ENST00000610401 A0A1W2PNV4 684 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 NUDT19A8MXV4 375 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 CTSDP07339 412 aaPredicted RBP17.72■□□□□ 0.43
SSBP3-216ENST00000610401 RHBDD2Q6NTF9 364 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 Q96M66 194 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 TRAV39A0A0B4J263 110 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 ST8SIA3O43173 380 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 TRAPPC6AO75865 159 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 HEXAP06865 529 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 DANCRP0C864 163 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 TMEM187Q14656 261 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 GNMTQ14749 295 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 FBLN5Q9UBX5 448 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 DKKL1Q9UK85 242 aa17.72■□□□□ 0.43
SSBP3-216ENST00000610401 RP1L1Q8IWN7 2480 aaPredicted RBP17.72■□□□□ 0.43
SSBP3-216ENST00000610401 AQP7P3A6NL99 342 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 PRF1P14222 555 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 GNRHRP30968 328 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 NTF4P34130 210 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 TAGLN2P37802 199 aaKnown RBP17.71■□□□□ 0.43
SSBP3-216ENST00000610401 GFI1BQ5VTD9 330 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 PLCXD3Q63HM9 321 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 FGFBP3Q8TAT2 258 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 RPS18P62269 152 aaKnown RBP17.71■□□□□ 0.43
SSBP3-216ENST00000610401 SLC25A24Q6NUK1 477 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 SLC25A26Q70HW3 274 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 HIST2H3AQ71DI3 136 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 HS3ST6Q96QI5 342 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 CFAP47Q6ZTR5 3102 aa17.71■□□□□ 0.43
SSBP3-216ENST00000610401 CEACAM18A8MTB9 384 aa17.71■□□□□ 0.42
SSBP3-216ENST00000610401 HLA-HP01893 362 aa17.71■□□□□ 0.42
SSBP3-216ENST00000610401 UBAC2Q8NBM4 344 aa17.71■□□□□ 0.42
SSBP3-216ENST00000610401 DMBX1Q8NFW5 382 aa17.71■□□□□ 0.42
SSBP3-216ENST00000610401 RARRES3Q9UL19 164 aa17.71■□□□□ 0.42
SSBP3-216ENST00000610401 ATP6V0CP27449 155 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 CCL7P80098 99 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 SHBQ15464 509 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 OR5C1Q8NGR4 320 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 EDARADDQ8WWZ3 215 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 OIT3Q8WWZ8 545 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 SLC35B3Q9H1N7 401 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 STARD10Q9Y365 291 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 MTCH2Q9Y6C9 303 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF32P17041 273 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 FAM3AP98173 230 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 EWSR1Q01844 656 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■■■□□ 18.8
SSBP3-216ENST00000610401 VASH2Q86V25 355 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 C17orf82Q86X59 251 aaPredicted RBP17.7■□□□□ 0.42
SSBP3-216ENST00000610401 CALHM1Q8IU99 346 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 SPTSSAQ969W0 71 aa17.7■□□□□ 0.42
SSBP3-216ENST00000610401 A0A096LPE4 126 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 A0A1W2PPZ6 126 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 BCAT2O15382 392 aaPredicted RBP17.69■□□□□ 0.42
SSBP3-216ENST00000610401 RPS23P62266 143 aaKnown RBP17.69■□□□□ 0.42
SSBP3-216ENST00000610401 RHOVQ96L33 236 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 ANAPC10Q9UM13 185 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 NRASP01111 189 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 RBP2P50120 134 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 SRYQ05066 204 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 TSC22D1Q15714 1073 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF695Q8IW36 515 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 ZNF251Q9BRH9 671 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 SRXN1Q9BYN0 137 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 A0A0J9YW62 118 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 ADAM20O43506 726 aa17.69■□□□□ 0.42
SSBP3-216ENST00000610401 UBE2KP61086 200 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms