RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 CDH20Q9HBT6 801 aa12.92□□□□□ -0.34
CCDC12-211ENST00000604367 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
CCDC12-211ENST00000604367 EDARQ9UNE0 448 aa12.92□□□□□ -0.34
CCDC12-211ENST00000604367 DMXL2Q8TDJ6 3036 aa12.92□□□□□ -0.34
CCDC12-211ENST00000604367 CACNA1GO43497 2377 aa12.92□□□□□ -0.34
CCDC12-211ENST00000604367 AGFG2O95081 481 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 SUPT4H1P63272 117 aaKnown RBP12.91□□□□□ -0.34
CCDC12-211ENST00000604367 SLC22A25Q6T423 547 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 ASB13Q8WXK3 278 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 MARS2Q96GW9 593 aaKnown RBP12.91□□□□□ -0.34
CCDC12-211ENST00000604367 LIME1Q9H400 295 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 COMMD9Q9P000 198 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 C5orf51A6NDU8 294 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 TRAPPC2LH3BP13 241 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 SMPD2O60906 423 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 C4BPBP20851 252 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 DTYMKP23919 212 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 S100A11P31949 105 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 MRPL49Q13405 166 aaKnown RBP12.91□□□□□ -0.34
CCDC12-211ENST00000604367 TMUB2Q71RG4 321 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 SNIP1Q8TAD8 396 aaKnown RBP12.91□□□□□ -0.34
CCDC12-211ENST00000604367 CITED4Q96RK1 184 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 MFFQ9GZY8 342 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 ATMQ13315 3056 aa12.91□□□□□ -0.34
CCDC12-211ENST00000604367 SFT2D2O95562 160 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 CD8AP01732 235 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 HOXC12P31275 282 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 FGF12P61328 243 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 PPP1CBP62140 327 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 ATXN7L3Q14CW9 347 aaPredicted RBP12.9□□□□□ -0.34
CCDC12-211ENST00000604367 Q6ZPA2 131 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 ZNF546Q86UE3 836 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 C12orf4Q9NQ89 552 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 RDH8Q9NYR8 311 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 DKK4Q9UBT3 224 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 MPC1Q9Y5U8 109 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 IGHV3-64DA0A0J9YX35 117 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 ADAP1O75689 374 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 IFNA7P01567 189 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 SERPINF1P36955 418 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 IGFL3Q6UXB1 125 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 MKXQ8IYA7 352 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 OR6K3Q8NGY3 331 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 TOMM40LQ969M1 308 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 CHMP1AQ9HD42 196 aaPredicted RBP12.9□□□□□ -0.34
CCDC12-211ENST00000604367 NECAP2Q9NVZ3 263 aa12.9□□□□□ -0.34
CCDC12-211ENST00000604367 C14orf166Q9Y224 244 aaKnown RBP12.9□□□□□ -0.34
CCDC12-211ENST00000604367 RP1L1Q8IWN7 2480 aaPredicted RBP12.9□□□□□ -0.35
CCDC12-211ENST00000604367 DBX1A6NMT0 343 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 AHRRA9YTQ3 701 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 RRP8O43159 456 aaKnown RBP12.89□□□□□ -0.35
CCDC12-211ENST00000604367 PRKACAP17612 351 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 HLA-GP17693 338 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 FXYD4P59646 89 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 GNG3P63215 75 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 FGL1Q08830 312 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 ANKRD55Q3KP44 614 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 ZNF660Q6AZW8 331 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-211ENST00000604367 Q8NFD4 153 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 EXTL1Q92935 676 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 OPN3Q9H1Y3 402 aaPredicted RBP12.89□□□□□ -0.35
CCDC12-211ENST00000604367 WDR13Q9H1Z4 485 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 UBQLN2Q9UHD9 624 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 APC2O95996 2303 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 SHANK1Q9Y566 2161 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 ANKRD34BA5PLL1 514 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 RHBDL1O75783 438 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 CALCRP30988 508 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 IKZF1Q13422 519 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 ALKBH6Q3KRA9 238 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 ELP2Q6IA86 826 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 OR2A2Q6IF42 318 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 C3P1Q6ZMU1 363 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 TMEM200AQ86VY9 491 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 ZNF573Q86YE8 665 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 SAXO1Q8IYX7 474 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 C17orf78Q8N4C9 275 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 ZNF610Q8N9Z0 462 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 OR1J1Q8NGS3 322 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 SLC25A40Q8TBP6 338 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 NEK7Q8TDX7 302 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 ZNF286AQ9HBT8 521 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 MAB21L2Q9Y586 359 aa12.89□□□□□ -0.35
CCDC12-211ENST00000604367 ARID1AO14497 2285 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 MPTX1A8MV57 137 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 SRSF4Q08170 494 aaKnown RBP12.88□□□□□ -0.35
CCDC12-211ENST00000604367 C11orf87Q6NUJ2 197 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 INO80CQ6PI98 192 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-211ENST00000604367 Q6ZS92 163 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 C5orf24Q7Z6I8 188 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 CCDC36Q8IYA8 594 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 ANKRD11Q6UB99 2663 aaPredicted RBP12.88□□□□□ -0.35
CCDC12-211ENST00000604367 ACACAQ13085 2346 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 OR5B21A6NL26 309 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 RP2O75695 350 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 TNFSF13O75888 250 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 RPS2P15880 293 aaKnown RBP12.88□□□□□ -0.35
CCDC12-211ENST00000604367 FCGR2CP31995 323 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 PTGER4P35408 488 aa12.88□□□□□ -0.35
CCDC12-211ENST00000604367 UCP2P55851 309 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms