RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CHST5Q9GZS9 411 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 LINC00312Q9Y6C7 94 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 SESN1Q9Y6P5 492 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 MINOS1-NBL1R4GNA1 71 aa10.58□□□□□ -0.72
RPS28-204ENST00000602140 IGHV2-26A0A0B4J1V2 119 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 PSPNO60542 156 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 SULT1C4O75897 302 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 CALCBP10092 127 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 PEX2P28328 305 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 DUSP1P28562 367 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 HTR1FP30939 366 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 ATP6V1E1P36543 226 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 POLR2IP36954 125 aaKnown RBP10.57□□□□□ -0.72
RPS28-204ENST00000602140 VDAC2P45880 294 aaPredicted RBP10.57□□□□□ -0.72
RPS28-204ENST00000602140 NPBWR2P48146 333 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 ZNF91Q05481 1191 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 TMEM95Q3KNT9 176 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 ENTHD1Q8IYW4 607 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 RDH10Q8IZV5 341 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 PRSS35Q8N3Z0 413 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 CCDC54Q8NEL0 328 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 OR10H4Q8NGA5 316 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 MRAPQ8TCY5 172 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 CIB1Q99828 191 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 CLEC7AQ9BXN2 247 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 TMEM133Q9H2Q1 129 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 SEBOXQ9HB31 216 aaPredicted RBP10.57□□□□□ -0.72
RPS28-204ENST00000602140 RBFOX1Q9NWB1 397 aaKnown RBP10.57□□□□□ -0.72
RPS28-204ENST00000602140 ENOPH1Q9UHY7 261 aa10.57□□□□□ -0.72
RPS28-204ENST00000602140 TRBV2A0A0J9YWF9 115 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 LOC107986453A0A1B0GWG9 222 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 MMP23AO75900 390 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 CYB5AP00167 134 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 BCL3P20749 454 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 FASP25445 335 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 KIR3DL2P43630 455 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 POU3F4P49335 361 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 RBP2P50120 134 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 ATP1B3P54709 279 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 SNU13P55769 128 aaKnown RBP10.56□□□□□ -0.72
RPS28-204ENST00000602140 AMIGO2Q86SJ2 522 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 TRAPPC6BQ86SZ2 158 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 Q8IYB0 196 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 FAM58AQ8N1B3 248 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 DNAAF1Q8NEP3 725 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 PP6455Q8WZ26 134 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 PHF21AQ96BD5 680 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 C10orf35Q96D05 121 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 ADAT3Q96EY9 351 aaPredicted RBP10.56□□□□□ -0.72
RPS28-204ENST00000602140 OCSTAMPQ9BR26 566 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 GABARAPL1Q9H0R8 117 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 NECAP2Q9NVZ3 263 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 GNG8Q9UK08 70 aa10.56□□□□□ -0.72
RPS28-204ENST00000602140 DSCAML1Q8TD84 2053 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 IGKV1-9A0A0C4DH69 117 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 A0A1W2PRX2 142 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 FAM90A22PA8MWA6 464 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 H3BUI4 141 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 MGST3O14880 152 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 ENTPD6O75354 484 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 ALDOBP05062 364 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 UBCP0CG48 685 aaKnown RBP10.55□□□□□ -0.72
RPS28-204ENST00000602140 PRKACAP17612 351 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 AZGP1P25311 298 aaKnown RBP10.55□□□□□ -0.72
RPS28-204ENST00000602140 HTR1DP28221 377 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 OR3A1P47881 315 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 MTCP1P56278 107 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 LOXL3P58215 753 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 ZNF146Q15072 292 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 TP53I3Q53FA7 332 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 BAIAP2L2Q6UXY1 529 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 ZBTB49Q6ZSB9 765 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 FAM220AQ7Z4H9 259 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 OR5AU1Q8NGC0 362 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 BCAS4Q8TDM0 211 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 EME1Q96AY2 570 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 RIBC2Q9H4K1 309 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 AURKAIP1Q9NWT8 199 aaPredicted RBP10.55□□□□□ -0.72
RPS28-204ENST00000602140 GLS2Q9UI32 602 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 AP4S1Q9Y587 144 aa10.55□□□□□ -0.72
RPS28-204ENST00000602140 SIRPB1O00241 398 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 ALX3O95076 343 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 CD33P20138 364 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 PRKACBP22694 351 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 CD24P25063 80 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 ERP29P30040 261 aaKnown RBP10.54□□□□□ -0.72
RPS28-204ENST00000602140 P2RX3P56373 397 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 ISL1P61371 349 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 CD83Q01151 205 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 ZNF85Q03923 595 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 TMED1Q13445 227 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 IL18R1Q13478 541 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 PRAMEF5Q5TYX0 476 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 TMEM244Q5VVB8 128 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 ABHD12Q8N2K0 398 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 OR4P4Q8NGL7 312 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 OR8J1Q8NGP2 316 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 OR2G2Q8NGZ5 317 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 RFKQ969G6 155 aa10.54□□□□□ -0.72
RPS28-204ENST00000602140 RNF166Q96A37 237 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms