RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 DHRS9Q9BPW9 319 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 FN3KRPQ9HA64 309 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 IFT46Q9NQC8 304 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 C1orf123Q9NWV4 160 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 ZNF107Q9UII5 783 aaPredicted RBP15.24■□□□□ 0.03
VRK3-225ENST00000601912 ICE1Q9Y2F5 2266 aa15.24■□□□□ 0.03
VRK3-225ENST00000601912 PLAUP00749 431 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 RCVRNP35243 200 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 FAUP35544 74 aaKnown RBP15.23■□□□□ 0.03
VRK3-225ENST00000601912 CBX5P45973 191 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 MRPS15P82914 257 aaKnown RBP15.23■□□□□ 0.03
VRK3-225ENST00000601912 IKZF1Q13422 519 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 EFNB3Q15768 340 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 ZNF672Q499Z4 452 aaPredicted RBP15.23■□□□□ 0.03
VRK3-225ENST00000601912 ATAD3CQ5T2N8 411 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 OLFML2AQ68BL7 652 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 Q6ZNX1 250 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 ZNF826PQ6ZT77 177 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 HS3ST6Q96QI5 342 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 TMEM204Q9BSN7 226 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 SPACA1Q9HBV2 294 aa15.23■□□□□ 0.03
VRK3-225ENST00000601912 FAM240BA0A1B0GVZ2 78 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 NAP1L6A6NFF2 107 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 C17orf100A8MU93 164 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 B9A039 149 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 ADH4P08319 380 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 RFX2P48378 723 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 RTN4RL2Q86UN3 420 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 OR10Z1Q8NGY1 313 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 ITLN1Q8WWA0 313 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 FAAP24Q9BTP7 215 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 LOXP28300 417 aaPredicted RBP15.22■□□□□ 0.03
VRK3-225ENST00000601912 PMELP40967 661 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 GATA4P43694 442 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 TAS2R19P59542 299 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 PDCD1Q15116 288 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 CCBE1Q6UXH8 406 aaPredicted RBP15.22■□□□□ 0.03
VRK3-225ENST00000601912 TMEM229BQ8NBD8 167 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 ERGIC1Q969X5 290 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 MS4A5Q9H3V2 200 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 HES4Q9HCC6 221 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 DYNLRB1Q9NP97 96 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 IL36RNQ9UBH0 155 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 GLS2Q9UI32 602 aa15.22■□□□□ 0.03
VRK3-225ENST00000601912 ROS1P08922 2347 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 SSX5O60225 188 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 AKAIN1P0CW23 69 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 TNFRSF1AP19438 455 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 GLRA1P23415 457 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 DUSP1P28562 367 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 CFHR2P36980 270 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 GMFBP60983 142 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 SPIN3Q5JUX0 258 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 MOGAT3Q86VF5 341 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 LILRB1Q8NHL6 650 aaPredicted RBP15.21■□□□□ 0.03
VRK3-225ENST00000601912 LRRC29Q8WV35 223 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 SULT4A1Q9BR01 284 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 OCSTAMPQ9BR26 566 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 EGLN1Q9GZT9 426 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 HRASLSQ9HDD0 168 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 RASL12Q9NYN1 266 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 ZNF581Q9P0T4 197 aa15.21■□□□□ 0.03
VRK3-225ENST00000601912 ZNF736B4DX44 427 aaPredicted RBP15.2■□□□□ 0.02
VRK3-225ENST00000601912 SH2D1BO14796 132 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 DEGS1O15121 323 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 SSX4O60224 188 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 MT-ND4P03905 459 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 FCER2P06734 321 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 CD55P08174 381 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 SMIM21Q3B7S5 101 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 FAM209AQ5JX71 171 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 MUC15Q8N387 334 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 CMSS1Q9BQ75 279 aaKnown RBP15.2■□□□□ 0.02
VRK3-225ENST00000601912 IFT22Q9H7X7 185 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 DECR2Q9NUI1 292 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 RCC2Q9P258 522 aaKnown RBP15.2■□□□□ 0.02
VRK3-225ENST00000601912 AK3Q9UIJ7 227 aa15.2■□□□□ 0.02
VRK3-225ENST00000601912 A0A1B0GVG6 124 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 MCRIP1C9JLW8 97 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 SPNP16150 400 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 SLC6A1P30531 599 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 DAZAP2Q15038 168 aaPredicted RBP15.19■□□□□ 0.02
VRK3-225ENST00000601912 ZNF146Q15072 292 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 TESK1Q15569 626 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 STEAP1BQ6NZ63 245 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 BRICD5Q6PL45 260 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 GVQW1Q8N7I0 195 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 DUSP18Q8NEJ0 188 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 DPAGT1Q9H3H5 408 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 MCUBQ9NWR8 336 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 PLEKHA6Q9Y2H5 1048 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 UBE2QL1A1L167 161 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 C19orf84I3L1E1 186 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 CD3DP04234 171 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 GLAP06280 429 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 ZNF44P15621 663 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 IGFBP2P18065 325 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 SNRPD2P62316 118 aaKnown RBP15.19■□□□□ 0.02
VRK3-225ENST00000601912 CCL8P80075 99 aa15.19■□□□□ 0.02
VRK3-225ENST00000601912 RBM39Q14498 530 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms