RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, human

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-229	ENST00000601373	NLK	Q9UBE8	527 aa		11.64	□□□□□ -0.55
IRF3-229	ENST00000601373	POU2F3	Q9UKI9	436 aa		11.64	□□□□□ -0.55
IRF3-229	ENST00000601373	KCNK7	Q9Y2U2	307 aa		11.64	□□□□□ -0.55
IRF3-229	ENST00000601373	CENPE	Q02224	2701 aa		11.64	□□□□□ -0.55
IRF3-229	ENST00000601373	hCG_2014768	A0A024R1R8	64 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	MEIS3P1	A6NDR6	274 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	ZNF736	B4DX44	427 aa	Predicted RBP	11.63	□□□□□ -0.55
IRF3-229	ENST00000601373		F5H5P2	479 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	CDIPT	O14735	213 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	SSX5	O60225	188 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	CLDN14	O95500	239 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	PTBP3	O95758	552 aa	Known RBP	11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	GLA	P06280	429 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	PGA5	P0DJD9	388 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	NAT1	P18440	290 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	TBP	P20226	339 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	UQCRFS1	P47985	274 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	ERVK11-1	P61568	191 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	MRPS15	P82914	257 aa	Known RBP	11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	MAB21L1	Q13394	359 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	MEF2D	Q14814	521 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	NKPD1	Q17RQ9	610 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	NKAPL	Q5M9Q1	402 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	HIST2H2BC	Q6DN03	193 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	SIGIRR	Q6IA17	410 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	STEAP1B	Q6NZ63	245 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	FIP1L1	Q6UN15	594 aa	Known RBP	11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	POC1A	Q8NBT0	407 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	OR2Z1	Q8NG97	314 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	OR10AD1	Q8NGE0	317 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	LINC01560	Q8TB33	94 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	NUDCD2	Q8WVJ2	157 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	EMG1	Q92979	244 aa	Known RBP	11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	CREB3L1	Q96BA8	519 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	PLPPR2	Q96GM1	343 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	DIRC2	Q96SL1	478 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	NRIP2	Q9BQI9	281 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	ELF5	Q9UKW6	265 aa	Predicted RBP	11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	ZDHHC8	Q9ULC8	765 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	ANAPC10	Q9UM13	185 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	NUBP2	Q9Y5Y2	271 aa		11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	ANKRD17	O75179	2603 aa	Known RBP	11.63	□□□□□ -0.55
IRF3-229	ENST00000601373	DIDO1	Q9BTC0	2240 aa	Known RBP	11.62	□□□□□ -0.55
IRF3-229	ENST00000601373		A6NLC8	198 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	RHBDL1	O75783	438 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	OR7C1	O76099	320 aa	Predicted RBP	11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	RAB3D	O95716	219 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	MT-ND4	P03905	459 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	CD74	P04233	296 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	TCRB	P04435	133 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	OR4A8	P0C604	315 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	PRKACA	P17612	351 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	TNFSF4	P23510	183 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	GIF	P27352	417 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	BTC	P35070	178 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	ZNF81	P51508	661 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	BTG1	P62324	171 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	ACTBL2	Q562R1	376 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	C6orf201	Q7Z4U5	140 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	C11orf53	Q8IXP5	236 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	OR10Z1	Q8NGY1	313 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	ELMOD3	Q96FG2	381 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	MARVELD1	Q9BSK0	173 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	CHST6	Q9GZX3	395 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	MMP28	Q9H239	520 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	IFT22	Q9H7X7	185 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	METRN	Q9UJH8	293 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	EDAR	Q9UNE0	448 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	PLEKHA6	Q9Y2H5	1048 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	CACNA1D	Q01668	2161 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	DOPEY1	Q5JWR5	2465 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	ABCA12	Q86UK0	2595 aa		11.62	□□□□□ -0.55
IRF3-229	ENST00000601373	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	ZSCAN5B	A6NJL1	495 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373		F8VVB4	439 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373		F8VWA3	439 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	INMT-MINDY4	F8WBC2	141 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	CD3D	P04234	171 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	ADH4	P08319	380 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	CFHR2	P36980	270 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	RAG2	P55895	527 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	RIPPLY3	P57055	190 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	TFF3	Q07654	80 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	ADIPOQ	Q15848	244 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	ATAD3C	Q5T2N8	411 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	SFRP4	Q6FHJ7	346 aa	Predicted RBP	11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	ADAM5	Q6NVV9	412 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	ZNF782	Q6ZMW2	699 aa	Predicted RBP	11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	BTN2A1	Q7KYR7	527 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	HOGA1	Q86XE5	327 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	OR4C16	Q8NGL9	310 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	FBXW5	Q969U6	566 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	ERGIC1	Q969X5	290 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	CMSS1	Q9BQ75	279 aa	Known RBP	11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	FAAP24	Q9BTP7	215 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	MCUB	Q9NWR8	336 aa		11.61	□□□□□ -0.55
IRF3-229	ENST00000601373	RASL12	Q9NYN1	266 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms