RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	ZNRD1	Q9P1U0	126 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	DHDH	Q9UQ10	334 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	FAM96B	Q9Y3D0	163 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	HSPE1-MOB4	S4R3N1	261 aa		12.65	□□□□□ -0.38
PLD3-223	ENST00000600948	KIAA2026	Q5HYC2	2103 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948		A0A1W2PPH5	198 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	SULT1B1	O43704	296 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	GNAO1	P09471	354 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	CALCB	P10092	127 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	PIP	P12273	146 aa	Predicted RBP	12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	PRKACA	P17612	351 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	DUSP1	P28562	367 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	DLX6	P56179	175 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	ZNF146	Q15072	292 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	CCDC58	Q4VC31	144 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	LAIR2	Q6ISS4	152 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	RPL22L1	Q6P5R6	122 aa	Known RBP	12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	TMPRSS11A	Q6ZMR5	421 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	SERPINA12	Q8IW75	414 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	OR5D18	Q8NGL1	313 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	OR5D14	Q8NGL3	314 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	TSEN15	Q8WW01	171 aa	Known RBP	12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	SNX22	Q96L94	193 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	NEK6	Q9HC98	313 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	HMG20A	Q9NP66	347 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	CLEC2D	Q9UHP7	191 aa		12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	SIRT4	Q9Y6E7	314 aa	Predicted RBP	12.64	□□□□□ -0.39
PLD3-223	ENST00000600948	MEIOC	A2RUB1	952 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	KDM4B	O94953	1096 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	LALBA	P00709	142 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	MYL12A	P19105	171 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	OMG	P23515	440 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	SNU13	P55769	128 aa	Known RBP	12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	ERVFRD-1	P60508	538 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	ZP1	P60852	638 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	SPIN3	Q5JUX0	258 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	ASPHD2	Q6ICH7	369 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	ZNF529	Q6P280	563 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	GDPD3	Q7L5L3	318 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	SAXO1	Q8IYX7	474 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	C8orf59	Q8N0T1	100 aa	Predicted RBP	12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	ZNF485	Q8NCK3	441 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	OR52N4	Q8NGI2	321 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	FBLIM1	Q8WUP2	373 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	GGH	Q92820	318 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	TMEM80	Q96HE8	168 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	AJUBA	Q96IF1	538 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	ZNF747	Q9BV97	191 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	DCLRE1B	Q9H816	532 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	BABAM2	Q9NXR7	383 aa		12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	SF3B6	Q9Y3B4	125 aa	Known RBP	12.63	□□□□□ -0.39
PLD3-223	ENST00000600948	C17orf98	A8MV24	154 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	OGG1	O15527	345 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	GPR137B	O60478	399 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	PSPN	O60542	156 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	HCK	P08631	526 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	MDK	P21741	143 aa	Predicted RBP	12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	SOX2	P48431	317 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	EDDM3B	P56851	147 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	RELB	Q01201	579 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	KISS1	Q15726	138 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	TAF9	Q16594	264 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	MIDN	Q504T8	468 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	TCF23	Q7RTU1	214 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	OR52N1	Q8NH53	320 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	GPR148	Q8TDV2	347 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	C17orf50	Q8WW18	174 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	DYRK2	Q92630	601 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	SMIM19	Q96E16	107 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	CHST6	Q9GZX3	395 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	DPAGT1	Q9H3H5	408 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	HEXA-AS1	Q9H8Q6	139 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	C1RL	Q9NZP8	487 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	GSTK1	Q9Y2Q3	226 aa		12.62	□□□□□ -0.39
PLD3-223	ENST00000600948	hCG_1809904	A0A1W2PP81	198 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948		A0A1W2PPE2	198 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948		A0A1W2PR64	198 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948		A0A1W2PRV1	198 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	MEX3A	A1L020	520 aa	Known RBP	12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	EFCAB10	A6NFE3	127 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	XPNPEP2	O43895	674 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	ZNF728	P0DKX0	622 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	GABRR1	P24046	479 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	OR3A1	P47881	315 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	RAG2	P55895	527 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	RPL15	P61313	204 aa	Known RBP	12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	MEF2C	Q06413	473 aa	Predicted RBP	12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	ST3GAL4	Q11206	333 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	EDDM3A	Q14507	147 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	GRK1	Q15835	563 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	ZNF782	Q6ZMW2	699 aa	Predicted RBP	12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	BEND2	Q8NDZ0	799 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	OR4S1	Q8NGB4	309 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	OR51A2	Q8NGJ7	313 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	RHOF	Q9HBH0	211 aa		12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	EXOSC4	Q9NPD3	245 aa	Known RBP	12.61	□□□□□ -0.39
PLD3-223	ENST00000600948	PLCXD1	Q9NUJ7	323 aa		12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms