RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ZNF175Q9Y473 711 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 FAM157AC9JC47 383 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 E5RGE8 158 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 NOVA1P51513 510 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 SWI5Q1ZZU3 235 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 IQCF2Q8IXL9 164 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF845Q96IR2 970 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 ADGRG7Q96K78 797 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 WFDC1Q9HC57 220 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 NSG2Q9Y328 171 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNHIT1O43257 154 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 EDN3P14138 238 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 TCN2P20062 427 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 FUT6P51993 359 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 FAM76BQ5HYJ3 339 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 LIAT1Q6ZQX7 453 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 OR2V1Q8NHB1 315 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 MSI2Q96DH6 328 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 C18orf12Q96KH6 178 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF286AQ9HBT8 521 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 GPR35Q9HC97 309 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 DEPPQ9NTK1 212 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 P4HTMQ9NXG6 502 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 SLC7A11Q9UPY5 501 aa17.49■□□□□ 0.39
SHKBP1-225ENST00000600733 RFC3P40938 356 aa17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 TRA2AQ13595 282 aaKnown RBP eCLIP17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 DAZAP2Q15038 168 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 ABLIM2Q6H8Q1 611 aa17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 ETV3LQ6ZN32 361 aa17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 PPP1R32Q7Z5V6 425 aa17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 RXFP4Q8TDU9 374 aa17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 KIRREL1Q96J84 757 aa17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 AKR1E2Q96JD6 320 aa17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 SUCNR1Q9BXA5 334 aa17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 ZDHHC8Q9ULC8 765 aa17.48■□□□□ 0.39
SHKBP1-225ENST00000600733 FREM1Q5H8C1 2179 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 H7C1Q1 480 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 PDCD6O75340 191 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 NPBWR2P48146 333 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 DVL1P1P54792 670 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 MALLQ13021 153 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 OR8B8Q15620 311 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF528Q3MIS6 628 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 AKIRIN2Q53H80 203 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 SLC23A3Q6PIS1 610 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 MOB3AQ96BX8 217 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 KLF2Q9Y5W3 355 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 MEX3AA1L020 520 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 PCP4L1A6NKN8 68 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 PHF1O43189 567 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 NME2P1O60361 137 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 OR7C1O76099 320 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 CRYBA1P05813 215 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 AADACP22760 399 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 FHITP49789 147 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 RAB13P51153 203 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 RBM11P57052 281 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF100Q8IYN0 542 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 LRTM2Q8N967 370 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 LYPD6BQ8NI32 183 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 SECTM1Q8WVN6 248 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 RGCCQ9H4X1 137 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF442Q9H7R0 627 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 IL36GQ9NZH8 169 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF391Q9UJN7 358 aa17.47■□□□□ 0.39
SHKBP1-225ENST00000600733 RPL35P42766 123 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 AKR1D1P51857 326 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 MIDNQ504T8 468 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 FBXW12Q6X9E4 464 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 SLC25A26Q70HW3 274 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 C5orf24Q7Z6I8 188 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF611Q8N823 705 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 CPEB3Q8NE35 698 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 FAM212BQ9NTI7 297 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 STARD10Q9Y365 291 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF816-ZNF321PA0A0X1KG74 233 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 PINLYPA6NC86 204 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 YKT6O15498 198 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 HEXAP06865 529 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 SPP1P10451 314 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 PPT1P50897 306 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF616Q08AN1 781 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 IGSF11Q5DX21 431 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 RIPPLY2Q5TAB7 128 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 MEX3BQ6ZN04 569 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 TP53RKQ96S44 253 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 ARV1Q9H2C2 271 aa17.46■□□□□ 0.39
SHKBP1-225ENST00000600733 PDGFBP01127 241 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 MMP7P09237 267 aaPredicted RBP17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 GDF1P27539 372 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 DUSP1P28562 367 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 AKR1C3P42330 323 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 PCBD1P61457 104 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 NHLH2Q02577 135 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 LGI3Q8N145 548 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 C2CD4CQ8TF44 421 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 SH3BGRL3Q9H299 93 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 DOCK10Q96BY6 2186 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 CCDC163A0A0D9SF12 145 aa17.45■□□□□ 0.38
SHKBP1-225ENST00000600733 GPR137BO60478 399 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms