RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 IL36RNQ9UBH0 155 aa7.2□□□□□ -1.26
SSBP4-208ENST00000600628 DNAJC9-AS1A6NH13 148 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 C17orf98A8MV24 154 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 PSPNO60542 156 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 RNASE1P07998 156 aaKnown RBP7.19□□□□□ -1.26
SSBP4-208ENST00000600628 CHRM2P08172 466 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 ZNF20P17024 532 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 MYL12AP19105 171 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 BCL3P20749 454 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 ERP29P30040 261 aaKnown RBP7.19□□□□□ -1.26
SSBP4-208ENST00000600628 CEBPDP49716 269 aaPredicted RBP7.19□□□□□ -1.26
SSBP4-208ENST00000600628 GP2P55259 537 aaKnown RBP7.19□□□□□ -1.26
SSBP4-208ENST00000600628 WNT4P56705 351 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 GMFBP60983 142 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 YIF1BQ5BJH7 314 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 NHLRC3Q5JS37 347 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 GPR157Q5UAW9 335 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 METTL11BQ5VVY1 283 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 TMEM200BQ69YZ2 307 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 Q6P435 159 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 UNQ9370/PRO34162Q6UXP9 181 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 BRD3OSQ6XYD6 125 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 Q6YL49 198 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 AHSA2Q719I0 299 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 VMO1Q7Z5L0 202 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 LDLRAD3Q86YD5 345 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 OR8H2Q8N162 312 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 FAM58AQ8N1B3 248 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 TMEM86BQ8N661 226 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 OR52N4Q8NGI2 321 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 OR51A2Q8NGJ7 313 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 OR51T1Q8NGJ9 327 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 GATAD2BQ8WXI9 593 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 GCDHQ92947 438 aaPredicted RBP7.19□□□□□ -1.26
SSBP4-208ENST00000600628 TMEM106AQ96A25 262 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 SLAMF9Q96A28 289 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 SNX22Q96L94 193 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 SPACA5Q96QH8 159 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 PCGF1Q9BSM1 259 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 METTL8Q9H825 291 aaKnown RBP7.19□□□□□ -1.26
SSBP4-208ENST00000600628 ELL3Q9HB65 397 aaPredicted RBP7.19□□□□□ -1.26
SSBP4-208ENST00000600628 NOX4Q9NPH5 578 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 IL36GQ9NZH8 169 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 PCDHGB5Q9Y5G0 923 aa7.19□□□□□ -1.26
SSBP4-208ENST00000600628 MEGF11A6BM72 1044 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 PIN1P1O15428 100 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 SPRY1O43609 319 aaPredicted RBP7.18□□□□□ -1.26
SSBP4-208ENST00000600628 CSN2P05814 226 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 CRHBPP24387 322 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 GABRA2P47869 451 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 OR3A1P47881 315 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 UBE2E1P51965 193 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 TAS2R43P59537 309 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 RPL31P62899 125 aaKnown RBP7.18□□□□□ -1.26
SSBP4-208ENST00000600628 ACTG1P63261 375 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 COL10A1Q03692 680 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 MEF2CQ06413 473 aaPredicted RBP7.18□□□□□ -1.26
SSBP4-208ENST00000600628 BAMBIQ13145 260 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 GPR50Q13585 617 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 SLC9A3R2Q15599 337 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 DEFB112Q30KQ8 113 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 Q499Y3 187 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 C12orf54Q6X4T0 127 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 CDH26Q8IXH8 852 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 BPIFB6Q8NFQ5 453 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 TBC1D15Q8TC07 691 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 CORO2AQ92828 525 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 IFT22Q9H7X7 185 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 DHDHQ9UQ10 334 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 MGAM2Q2M2H8 2515 aa7.18□□□□□ -1.26
SSBP4-208ENST00000600628 TRAV8-7A0A075B6U6 113 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 MDFIC2A0A1B0GVS7 189 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 MAGEA13PA6NCF6 341 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 FAM90A8PA6NJQ4 464 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 H0YHG0 523 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 GABRPO00591 440 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 ANGPTL7O43827 346 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 ATP6V1G2O95670 118 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 HAND1O96004 215 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 CD2P06729 351 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 CGB3P0DN86 165 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 CGB7P0DN87 165 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 HKR1P10072 659 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 NDUFB7P17568 137 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 RAB3AP20336 220 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 DLX1P56177 255 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 GUCA2AQ02747 115 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 MED21Q13503 144 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 ZNF273Q14593 569 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 RUSC1-AS1Q66K80 236 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 CMTM4Q8IZR5 234 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 BATF2Q8N1L9 274 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 TMEM185AQ8NFB2 350 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 OR5D13Q8NGL4 314 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 OR13C5Q8NGS8 318 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 LHX4Q969G2 390 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 DUX5Q96PT3 197 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 DERL3Q96Q80 235 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 OR5M11Q96RB7 305 aa7.17□□□□□ -1.26
SSBP4-208ENST00000600628 NCOR1P1Q9H4R4 102 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms