RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 NARFLQ9H6Q4 476 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 HMG20AQ9NP66 347 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 NOP16Q9Y3C1 178 aaKnown RBP10.64□□□□□ -0.71
UPF1-208ENST00000600012 V9GYH0 126 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 FAM157AC9JC47 383 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 C3orf80F5H4A9 247 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 J3QT63 122 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 CDC14BO60729 498 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 KDM4BO94953 1096 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 HTR3BO95264 441 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 COL8A2P25067 703 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 ETV6P41212 452 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 ZNF81P51508 661 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 CAPZA1P52907 286 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 ZNF154Q13106 437 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 MAB21L1Q13394 359 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 OR2W3Q7Z3T1 314 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 TEX29Q8N6K0 151 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 ZNF418Q8TF45 676 aaPredicted RBP10.63□□□□□ -0.71
UPF1-208ENST00000600012 ZNF488Q96MN9 340 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 CMTM3Q96MX0 182 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 WDR12Q9GZL7 423 aaKnown RBP10.63□□□□□ -0.71
UPF1-208ENST00000600012 METTL9Q9H1A3 318 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 ATG5Q9H1Y0 275 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 ABCG5Q9H222 651 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 OR51I2Q9H344 312 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 CYSLTR2Q9NS75 346 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 NKIRAS2Q9NYR9 191 aa10.63□□□□□ -0.71
UPF1-208ENST00000600012 TRAV20A0A0B4J274 112 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 FABP12A6NFH5 140 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 TMEM210A6NLX4 147 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 PPIHO43447 177 aaKnown RBP10.62□□□□□ -0.71
UPF1-208ENST00000600012 RHBDL1O75783 438 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 IGHV1-46P01743 117 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 SFTPBP07988 381 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 RAB6AP20340 208 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 BCL3P20749 454 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 TALDO1P37837 337 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 CD200P41217 278 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 NPBWR2P48146 333 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 ACTG1P63261 375 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 IL18Q14116 193 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 RSU1Q15404 277 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 MPPED2Q15777 294 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 ZNF79Q15937 498 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 SPRNQ5BIV9 151 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 ASCL4Q6XD76 172 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 ZNF573Q86YE8 665 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 SPERTQ8NA61 448 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 ZSCAN4Q8NAM6 433 aaPredicted RBP10.62□□□□□ -0.71
UPF1-208ENST00000600012 SCCPDHQ8NBX0 429 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 PXT1Q8NFP0 134 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 KCNG3Q8TAE7 436 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 RAB40AQ8WXH6 277 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 AQP3Q92482 292 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 YIPF5Q969M3 257 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 NICN1Q9BSH3 213 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 TMEM59Q9BXS4 323 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 CST11Q9H112 138 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 LPAR2Q9HBW0 351 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 UFSP2Q9NUQ7 469 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 C14orf119Q9NWQ9 140 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 TREM2Q9NZC2 230 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 GHRLQ9UBU3 117 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 FBLN5Q9UBX5 448 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 RAB22AQ9UL26 194 aa10.62□□□□□ -0.71
UPF1-208ENST00000600012 A0A0A6YYD4 124 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 A0A0G2JMP0 313 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 A0A0X1KG70 313 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 A6NLC8 198 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 WNT9BO14905 357 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 RP2O75695 350 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 CYB5AP00167 134 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 CSTBP04080 98 aaKnown RBP10.61□□□□□ -0.71
UPF1-208ENST00000600012 MGMTP16455 207 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 CDK2P24941 298 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 MPZP25189 248 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 RBMXP38159 391 aaKnown RBP10.61□□□□□ -0.71
UPF1-208ENST00000600012 RANBP1P43487 201 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 COMPP49747 757 aaPredicted RBP10.61□□□□□ -0.71
UPF1-208ENST00000600012 SNU13P55769 128 aaKnown RBP10.61□□□□□ -0.71
UPF1-208ENST00000600012 LMO4P61968 165 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 ZNF45Q02386 682 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 IL24Q13007 206 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 MOGAT2Q3SYC2 334 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 ZNF826PQ6ZT77 177 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 RTN4RL2Q86UN3 420 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 MKXQ8IYA7 352 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 OR4M2Q8NGB6 313 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 ITLN1Q8WWA0 313 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 PTX4Q96A99 478 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 S100A16Q96FQ6 103 aaKnown RBP10.61□□□□□ -0.71
UPF1-208ENST00000600012 MEGF10Q96KG7 1140 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 OR2V2Q96R30 315 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 PKIBQ9C010 78 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 SELENOIQ9C0D9 397 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 SRRQ9GZT4 340 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 LPAR5Q9H1C0 372 aa10.61□□□□□ -0.71
UPF1-208ENST00000600012 IL36GQ9NZH8 169 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms