RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 OPN1MW3P0DN78 364 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 PRKACAP17612 351 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 ATF1P18846 271 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 BCL3P20749 454 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 PRKACBP22694 351 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 AZGP1P25311 298 aaKnown RBP7.92□□□□□ -1.14
VRK3-216ENST00000599342 KIR3DL2P43630 455 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 RAB13P51153 203 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 SNU13P55769 128 aaKnown RBP7.92□□□□□ -1.14
VRK3-216ENST00000599342 ISL1P61371 349 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 ACTA2P62736 377 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 ACTG2P63267 376 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 ZNF91Q05481 1191 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 SPIN3Q5JUX0 258 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 ZBTB49Q6ZSB9 765 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 KCTD20Q7Z5Y7 419 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 TMEM219Q86XT9 240 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 RDH10Q8IZV5 341 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 FAM58AQ8N1B3 248 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 DYNAPQ8N1N2 210 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 TPRX1Q8N7U7 411 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 OR2G2Q8NGZ5 317 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 NDNFQ8TB73 568 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 PIFOQ8TCI5 191 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 TRUB1Q8WWH5 349 aaKnown RBP7.92□□□□□ -1.14
VRK3-216ENST00000599342 CFHR4Q92496 578 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 SPSB1Q96BD6 273 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 RNFT2Q96EX2 444 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 ADAT3Q96EY9 351 aaPredicted RBP7.92□□□□□ -1.14
VRK3-216ENST00000599342 MRPL48Q96GC5 212 aaKnown RBP7.92□□□□□ -1.14
VRK3-216ENST00000599342 OPALINQ96PE5 141 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 ZNF702PQ9H963 129 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 RBFOX1Q9NWB1 397 aaKnown RBP7.92□□□□□ -1.14
VRK3-216ENST00000599342 IL36RNQ9UBH0 155 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 PCDHGB5Q9Y5G0 923 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 HILPDAQ9Y5L2 63 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 SESN1Q9Y6P5 492 aa7.92□□□□□ -1.14
VRK3-216ENST00000599342 IGHV2-26A0A0B4J1V2 119 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 FUOMA2VDF0 154 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 A6NDX4 124 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 SH2D1BO14796 132 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 MGST3O14880 152 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 SLC16A6O15403 523 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 PSPNO60542 156 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 ENTPD6O75354 484 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 ISG15P05161 165 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 HTR1AP08908 422 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 DUSP1P28562 367 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 NPBWR2P48146 333 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 DYNLT3P51808 116 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 SLC34A1Q06495 639 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 IL18R1Q13478 541 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 HABP2Q14520 560 aaPredicted RBP7.91□□□□□ -1.14
VRK3-216ENST00000599342 ZNF146Q15072 292 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 MINOS1Q5TGZ0 78 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 MEDAGQ5VYS4 303 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 HIST2H2BDQ6DRA6 164 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 UTS2BQ765I0 119 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 TCF23Q7RTU1 214 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 OR52N4Q8NGI2 321 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 OR13C3Q8NGS6 347 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 PYDC1Q8WXC3 89 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 RFT1Q96AA3 541 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 FGGYQ96C11 551 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 MBOAT4Q96T53 435 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 MYCBPQ99417 103 aaPredicted RBP7.91□□□□□ -1.14
VRK3-216ENST00000599342 CLEC7AQ9BXN2 247 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 PRSS22Q9GZN4 317 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 GAL3ST2Q9H3Q3 398 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 SEBOXQ9HB31 216 aaPredicted RBP7.91□□□□□ -1.14
VRK3-216ENST00000599342 NEK6Q9HC98 313 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 EXOSC4Q9NPD3 245 aaKnown RBP7.91□□□□□ -1.14
VRK3-216ENST00000599342 FRRS1LQ9P0K9 344 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 HHLA2Q9UM44 414 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 GSTK1Q9Y2Q3 226 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 MINOS1-NBL1R4GNA1 71 aa7.91□□□□□ -1.14
VRK3-216ENST00000599342 PKD1L1Q8TDX9 2849 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 CMYA5Q8N3K9 4069 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 TRGV10A0A0A0MS01 117 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 IGKV1-9A0A0C4DH69 117 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 J3QLW9 94 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 SIRPB1O00241 398 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 EI24O14681 340 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 ALDOBP05062 364 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 ALPLP05186 524 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 CALCBP10092 127 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 ZNF19P17023 458 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 ERP29P30040 261 aaKnown RBP7.9□□□□□ -1.14
VRK3-216ENST00000599342 VDAC2P45880 294 aaPredicted RBP7.9□□□□□ -1.14
VRK3-216ENST00000599342 OR3A1P47881 315 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 ARHGDIBP52566 201 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 P2RX3P56373 397 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 PDZK1IP1Q13113 114 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 NSUN5P1Q3KNT7 163 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 OR52W1Q6IF63 320 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 CCBE1Q6UXH8 406 aaPredicted RBP7.9□□□□□ -1.14
VRK3-216ENST00000599342 LYG1Q8N1E2 194 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 Q8N2B8 174 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 ACBD7Q8N6N7 88 aa7.9□□□□□ -1.14
VRK3-216ENST00000599342 OR4S1Q8NGB4 309 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms