RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SPERTQ8NA61 448 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 SPSB1Q96BD6 273 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 C12orf43Q96C57 262 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 DGCR14Q96DF8 476 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 PATZ1Q9HBE1 687 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 TMEM138Q9NPI0 162 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 CKLFQ9UBR5 152 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 ZDHHC8Q9ULC8 765 aa11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 POLR3KQ9Y2Y1 108 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 NOP16Q9Y3C1 178 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-218ENST00000598907 DNAH9Q9NYC9 4486 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 PQLC2LA1A4F0 135 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 MEGF11A6BM72 1044 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 A8MXK9 166 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 PTBP3O95758 552 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 PRKACBP22694 351 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 MYL9P24844 172 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 BDKRB2P30411 391 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 SDC2P34741 201 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 CD200P41217 278 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 FUT6P51993 359 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 PPP3R1P63098 170 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 MAB21L1Q13394 359 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 OR8G1Q15617 311 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 SPRNQ5BIV9 151 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 DMRTC1Q5HYR2 192 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 PLCXD3Q63HM9 321 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 RNF144BQ7Z419 303 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 NR2C2APQ86WQ0 139 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 DYRK2Q92630 601 aa11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 ADAT1Q9BUB4 502 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 RSL24D1Q9UHA3 163 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-218ENST00000598907 IGKV1-27A0A075B6S5 117 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 OR5B21A6NL26 309 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 ANXA2P2A6NMY6 339 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 F5H5P2 479 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 PDCD5O14737 125 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 SLC22A1O15245 554 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 CDRT1O95170 752 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 IL1AP01583 271 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 MAS1P04201 325 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 RPS19P39019 145 aaKnown RBP11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 SPCS2Q15005 226 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 FAM209AQ5JX71 171 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 Q6ZSV7 163 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 WDR86Q86TI4 376 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 CELF2-AS1Q8N7Q2 184 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 NKAIN3Q8N8D7 197 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 C11orf44Q8N8P7 122 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 OR2Z1Q8NG97 314 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 OR10AD1Q8NGE0 317 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 OR52N4Q8NGI2 321 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 SSMEM1Q8WWF3 244 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 RNF170Q96K19 258 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 HIST1H2AAQ96QV6 131 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 MICU1Q9BPX6 476 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 RTL8AQ9BWD3 113 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 EGLN1Q9GZT9 426 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 FAM192AQ9GZU8 254 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 PRDM13Q9H4Q3 707 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 IL19Q9UHD0 177 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 SLC7A11Q9UPY5 501 aa11.47□□□□□ -0.57
SHKBP1-218ENST00000598907 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 TMEM210A6NLX4 147 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 ZNF732B4DXR9 585 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 IGHV4-59P01825 116 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 CLEC2LP0C7M8 214 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 PPIAL4GP0DN37 164 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 RAB3BP20337 219 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 GATA4P43694 442 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 RBP2P50120 134 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 PSMD7P51665 324 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 RPL15P61313 204 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 GNB2P62879 340 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 GNG3P63215 75 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 MZT1Q08AG7 82 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 KISS1Q15726 138 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 C1orf100Q5SVJ3 147 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 GPR157Q5UAW9 335 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 LHFPL2Q6ZUX7 228 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 C11orf53Q8IXP5 236 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 OR8S1Q8NH09 359 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 NDNFQ8TB73 568 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 PHF21AQ96BD5 680 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 FOXRED1Q96CU9 486 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 BORCS8Q96FH0 119 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 MEGF10Q96KG7 1140 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 TLNRD1Q9H1K6 362 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 OR51I2Q9H344 312 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 NEK6Q9HC98 313 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 C14orf119Q9NWQ9 140 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 AK6Q9Y3D8 172 aaKnown RBP11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 POMT1Q9Y6A1 747 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 V9GY05 133 aa11.46□□□□□ -0.57
SHKBP1-218ENST00000598907 IGHV2-70DA0A0C4DH43 119 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 FAM230AA0A1W2PPH8 454 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 F5H0A9 414 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 MAGEB3O15480 346 aa11.45□□□□□ -0.58
SHKBP1-218ENST00000598907 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms