RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 OR5D18Q8NGL1 313 aa11.95□□□□□ -0.5
XRCC1-208ENST00000598422 OR5R1Q8NH85 324 aa11.95□□□□□ -0.5
XRCC1-208ENST00000598422 PPP1R35Q8TAP8 253 aa11.95□□□□□ -0.5
XRCC1-208ENST00000598422 ZCCHC4Q9H5U6 513 aa11.95□□□□□ -0.5
XRCC1-208ENST00000598422 MRPS18AQ9NVS2 196 aaKnown RBP11.95□□□□□ -0.5
XRCC1-208ENST00000598422 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.95□□□□□ -0.5
XRCC1-208ENST00000598422 MMP24Q9Y5R2 645 aa11.95□□□□□ -0.5
XRCC1-208ENST00000598422 ZNF737O75373 536 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 ZFPL1O95159 310 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 MT-ND2P03891 347 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 PEX2P28328 305 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 NPBWR2P48146 333 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 LGALS4P56470 323 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 MED21Q13503 144 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 GRK1Q15835 563 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 SMN1Q16637 294 aaKnown RBP11.94□□□□□ -0.5
XRCC1-208ENST00000598422 SPIN3Q5JUX0 258 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 ZNF691Q5VV52 312 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 TMPRSS11AQ6ZMR5 421 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 PACRGLQ8N7B6 248 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 OR5D14Q8NGL3 314 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 CNIH3Q8TBE1 160 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 CPNE2Q96FN4 548 aaPredicted RBP11.94□□□□□ -0.5
XRCC1-208ENST00000598422 SNX22Q96L94 193 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 SPACA5Q96QH8 159 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 PDCD1LG2Q9BQ51 273 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 SLITRK2Q9H156 845 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
XRCC1-208ENST00000598422 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 hADV38S2A0JD32 116 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 E9PI62 339 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 SULT1B1O43704 296 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 WBP4O75554 376 aaKnown RBP11.93□□□□□ -0.5
XRCC1-208ENST00000598422 CLIC3O95833 236 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 ZNF728P0DKX0 622 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 CALCBP10092 127 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 DCKP27707 260 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 DUSP1P28562 367 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 RELBQ01201 579 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 OLFML2AQ68BL7 652 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 HCP5Q6MZN7 132 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 SERPINA12Q8IW75 414 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 BEND2Q8NDZ0 799 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 ZNF714Q96N38 554 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 JAM3Q9BX67 310 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 CHST6Q9GZX3 395 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 FGF20Q9NP95 211 aaPredicted RBP11.93□□□□□ -0.5
XRCC1-208ENST00000598422 EXOSC4Q9NPD3 245 aaKnown RBP11.93□□□□□ -0.5
XRCC1-208ENST00000598422 CHCHD3Q9NX63 227 aaKnown RBP11.93□□□□□ -0.5
XRCC1-208ENST00000598422 GSTK1Q9Y2Q3 226 aa11.93□□□□□ -0.5
XRCC1-208ENST00000598422 TMEM82A0PJX8 343 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 MEX3AA1L020 520 aaKnown RBP11.92□□□□□ -0.5
XRCC1-208ENST00000598422 CLPSL1A2RUU4 121 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 SIRPB1O00241 398 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 SH2D1BO14796 132 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 MAGEB3O15480 346 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 RBP4P02753 201 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 CD2P06729 351 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 LIMS3P0CW19 117 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 LIMS4P0CW20 117 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 TMEM225BP0DP42 221 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 RAB3AP20336 220 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 BMXP51813 675 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 MEF2CQ06413 473 aaPredicted RBP11.92□□□□□ -0.5
XRCC1-208ENST00000598422 BRICD5Q6PL45 260 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 TRAPPC6BQ86SZ2 158 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 DHRSXQ8N5I4 330 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 PARP16Q8N5Y8 322 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 OR13D1Q8NGV5 346 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 WFDC12Q8WWY7 111 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 ZNF649Q9BS31 505 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 VCXQ9H320 206 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 SEBOXQ9HB31 216 aaPredicted RBP11.92□□□□□ -0.5
XRCC1-208ENST00000598422 HMG20AQ9NP66 347 aa11.92□□□□□ -0.5
XRCC1-208ENST00000598422 H3BUX3 64 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 MGST3O14880 152 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 KDM4BO94953 1096 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 ZNF44P15621 663 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 TGFBR2P37173 567 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 SOX2P48431 317 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 ETV1P50549 477 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 GTF2A1P52655 376 aaPredicted RBP11.91□□□□□ -0.5
XRCC1-208ENST00000598422 P2RX3P56373 397 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 IL18R1Q13478 541 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 ZNF146Q15072 292 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 LRRC75BQ2VPJ9 315 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 CCDC58Q4VC31 144 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 RPL22L1Q6P5R6 122 aaKnown RBP11.91□□□□□ -0.5
XRCC1-208ENST00000598422 SAXO1Q8IYX7 474 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 TPRX1Q8N7U7 411 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 GPR148Q8TDV2 347 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 GPER1Q99527 375 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 SSX3Q99909 188 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 PPA2Q9H2U2 334 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 RHOFQ9HBH0 211 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 EXOSC1Q9Y3B2 195 aaKnown RBP11.91□□□□□ -0.5
XRCC1-208ENST00000598422 RNF114Q9Y508 228 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 LINC00312Q9Y6C7 94 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 TENM1Q9UKZ4 2725 aa11.91□□□□□ -0.5
XRCC1-208ENST00000598422 IGKV1-12A0A0C4DH73 117 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms