RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 OR2G2Q8NGZ5 317 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 OR2T27Q8NH04 317 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 TBC1D15Q8TC07 691 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 SLAMF9Q96A28 289 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 MNTQ99583 582 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 PRRG3Q9BZD7 231 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 DUSP21Q9H596 190 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 METTL8Q9H825 291 aaKnown RBP8.5□□□□□ -1.05
LIG1-213ENST00000596672 MOB1AQ9H8S9 216 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 PLCXD1Q9NUJ7 323 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 FRRS1LQ9P0K9 344 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 H2AFY2Q9P0M6 372 aaPredicted RBP8.5□□□□□ -1.05
LIG1-213ENST00000596672 OR14J1Q9UGF5 321 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 PSORS1C1Q9UIG5 152 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 VPREB3Q9UKI3 123 aa8.5□□□□□ -1.05
LIG1-213ENST00000596672 TRBV23-1A0A0A0MS06 115 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 FAM90A8PA6NJQ4 464 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 TRIM64CA6NLI5 447 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 DHRS7CA6NNS2 312 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 C17orf98A8MV24 154 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 H3BUX3 64 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 K7N7A8 449 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 ANGPTL7O43827 346 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 SULT1C4O75897 302 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 MMP23AO75900 390 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 NXPH2O95156 264 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 MT-ND2P03891 347 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 FBP1P09467 338 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 COX7A1P24310 79 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 DUSP1P28562 367 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 MAP2K4P45985 399 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 RAB13P51153 203 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 RPL31P62899 125 aaKnown RBP8.49□□□□□ -1.05
LIG1-213ENST00000596672 SLC35A2P78381 396 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 IL24Q13007 206 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 NEDD8Q15843 81 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 LY6EQ16553 131 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 SMIM21Q3B7S5 101 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 Q6ZS46 218 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 SATL1Q86VE3 508 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 ZNF573Q86YE8 665 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 CMTM4Q8IZR5 234 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 SPARTQ8N0X7 666 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 TPRX1Q8N7U7 411 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 MYDGFQ969H8 173 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 ITFG2Q969R8 447 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 DGCR14Q96DF8 476 aaKnown RBP8.49□□□□□ -1.05
LIG1-213ENST00000596672 PKIBQ9C010 78 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 CHST5Q9GZS9 411 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 MEGF9Q9H1U4 602 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 PPA2Q9H2U2 334 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 FAM96BQ9Y3D0 163 aa8.49□□□□□ -1.05
LIG1-213ENST00000596672 TET2Q6N021 2002 aaPredicted RBP8.48□□□□□ -1.05
LIG1-213ENST00000596672 A0A1B0GUS0 222 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 EFCAB10A6NFE3 127 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 OR4C45A6NMZ5 311 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 ODF3BA8MYP8 253 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 SYT7O43581 403 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 RGS10O43665 173 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 PSPNO60542 156 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 KRT8P05787 483 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 CRYBA1P05813 215 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 GDNFP39905 211 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 ALDH3B2P48448 385 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 CAPZA1P52907 286 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 DEFA6Q01524 100 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 GUCA2AQ02747 115 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 ACSM1Q08AH1 577 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 ST3GAL4Q11206 333 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 CNPY1Q3B7I2 92 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 SLC25A30Q5SVS4 291 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 MEDAGQ5VYS4 303 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 FDX2Q6P4F2 183 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 SLC25A26Q70HW3 274 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 STX19Q8N4C7 294 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 ZNF561Q8N587 486 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 OR4S1Q8NGB4 309 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 FGGYQ96C11 551 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 LGALS12Q96DT0 336 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 RNFT2Q96EX2 444 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 PELI1Q96FA3 418 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 SPACA5Q96QH8 159 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 SSX3Q99909 188 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 ISG20L2Q9H9L3 353 aaKnown RBP8.48□□□□□ -1.05
LIG1-213ENST00000596672 RBFOX1Q9NWB1 397 aaKnown RBP8.48□□□□□ -1.05
LIG1-213ENST00000596672 FKBP14Q9NWM8 211 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 GNG8Q9UK08 70 aa8.48□□□□□ -1.05
LIG1-213ENST00000596672 EXOGQ9Y2C4 368 aaKnown RBP8.48□□□□□ -1.05
LIG1-213ENST00000596672 RPL36Q9Y3U8 105 aaKnown RBP8.48□□□□□ -1.05
LIG1-213ENST00000596672 FADS2O95864 444 aaKnown RBP8.47□□□□□ -1.05
LIG1-213ENST00000596672 CDK1P06493 297 aa8.47□□□□□ -1.05
LIG1-213ENST00000596672 DBTP11182 482 aaKnown RBP8.47□□□□□ -1.05
LIG1-213ENST00000596672 BCL3P20749 454 aa8.47□□□□□ -1.05
LIG1-213ENST00000596672 C21orf33P30042 268 aaPredicted RBP8.47□□□□□ -1.05
LIG1-213ENST00000596672 EFNB2P52799 333 aa8.47□□□□□ -1.05
LIG1-213ENST00000596672 RPL15P61313 204 aaKnown RBP8.47□□□□□ -1.05
LIG1-213ENST00000596672 EMX1Q04741 257 aaPredicted RBP8.47□□□□□ -1.05
LIG1-213ENST00000596672 ZNF91Q05481 1191 aa8.47□□□□□ -1.05
LIG1-213ENST00000596672 DOC2BQ14184 412 aa8.47□□□□□ -1.05
LIG1-213ENST00000596672 HABP2Q14520 560 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms