RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 EEF1B2P24534 225 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 CEBPDP49716 269 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 RPS11P62280 158 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 COL10A1Q03692 680 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 ZNF146Q15072 292 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 ASCC1Q8N9N2 400 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 PXT1Q8NFP0 134 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 OR13C5Q8NGS8 318 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 SNX22Q96L94 193 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 S100A13Q99584 98 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 SIRPDQ9H106 197 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 ISYNA1Q9NPH2 558 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 TRAV40A0A0B4J280 105 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 M0R1W7 72 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 DENRO43583 198 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 IGHV4-38-2P0DP08 117 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 MMP9P14780 707 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 ZNF93P35789 620 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 TGFBR2P37173 567 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 MTNR1BP49286 362 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 ZP1P60852 638 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 DDI2Q5TDH0 399 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 C9orf139Q6ZV77 190 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 GDPD3Q7L5L3 318 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 FAM185AQ8N0U4 392 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 OR51A2Q8NGJ7 313 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 TNFAIP8L1Q8WVP5 186 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 UFD1Q92890 307 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 OR14A2Q96R54 314 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 TBX15Q96SF7 602 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 SLC6A7Q99884 636 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 EXOSC4Q9NPD3 245 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 PCDHB16Q9NRJ7 776 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 ZNF69Q9UC07 566 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 FOXJ3Q9UPW0 622 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 GSTK1Q9Y2Q3 226 aa14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 LSM2Q9Y333 95 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-212ENST00000596163 TRBV5-7A0A0A0MS05 114 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 IGKV1-12A0A0C4DH73 117 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 hCG_1809904A0A1W2PP81 198 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 A0A1W2PPE2 198 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 A0A1W2PR64 198 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 A0A1W2PRV1 198 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 RNF212BA8MTL3 300 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 MRPS14O60783 128 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 IGKV1D-12P01611 117 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 SFTPBP07988 381 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 IGFBP3P17936 291 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 FSTP19883 344 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 RPL31P62899 125 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 RSU1Q15404 277 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 CDH26Q8IXH8 852 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 OR52N4Q8NGI2 321 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 C22orf15Q8WYQ4 148 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 SGCDQ92629 289 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 OR5M11Q96RB7 305 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 YTHDF1Q9BYJ9 559 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 ELL3Q9HB65 397 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 DOCK11Q5JSL3 2073 aa14.24□□□□□ -0.13
SHKBP1-212ENST00000596163 IGHV3OR16-10A0A075B7F0 116 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 GABRPO00591 440 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 ZNF737O75373 536 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 GABRR1P24046 479 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 PTGFRP43088 359 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 HILS1P60008 231 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 GUCA2AQ02747 115 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 DOC2BQ14184 412 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 ELP2Q6IA86 826 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 ASPHD2Q6ICH7 369 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 RNF144BQ7Z419 303 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 VMO1Q7Z5L0 202 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 OR8H2Q8N162 312 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 ZFAND2BQ8WV99 257 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 LHX4Q969G2 390 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 DERL3Q96Q80 235 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 FAM192AQ9GZU8 254 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 METTL9Q9H1A3 318 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 METTL8Q9H825 291 aaKnown RBP14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 ING4Q9UNL4 249 aa14.23□□□□□ -0.13
SHKBP1-212ENST00000596163 SVEP1Q4LDE5 3571 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 CENPVL3A0A0U1RRI6 287 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 FUOMA2VDF0 154 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 MEGF11A6BM72 1044 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 TRIM77I1YAP6 450 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 ZNF780AO75290 641 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 HSMCR30P0CW71 290 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 CALCBP10092 127 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 DUSP1P28562 367 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 SNU13P55769 128 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 GABARAPL2P60520 117 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 TRAM1Q15629 374 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 ACSM3Q53FZ2 586 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 NCR3LG1Q68D85 454 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 CRIP3Q6Q6R5 217 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 METAP1DQ6UB28 335 aaPredicted RBP14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 ASCL4Q6XD76 172 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 CHST4Q8NCG5 386 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 TMED9Q9BVK6 235 aa14.22□□□□□ -0.13
SHKBP1-212ENST00000596163 IGHV1-69DA0A0B4J2H0 117 aa14.21□□□□□ -0.13
SHKBP1-212ENST00000596163 A0A1W2PPK0 400 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms