RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 AGAP6Q5VW22 663 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 Q6P435 159 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 ACP7Q6ZNF0 438 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 GCSAMQ8N6F7 178 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 LRRC29Q8WV35 223 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 ST8SIA4Q92187 359 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 YIPF5Q969M3 257 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 RAB3CQ96E17 227 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 ARHGAP5-AS1Q96IT6 56 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 PECRQ9BY49 303 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 IFT22Q9H7X7 185 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 FAIMQ9NVQ4 179 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 RASL12Q9NYN1 266 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 RCC2Q9P258 522 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 HSF4Q9ULV5 492 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 PLEKHA6Q9Y2H5 1048 aa12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 FASNP49327 2511 aaKnown RBP12.42□□□□□ -0.42
SHKBP1-211ENST00000595945 DSCAML1Q8TD84 2053 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 GABARAPH6UMI1 98 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 SULT1C2O00338 296 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 WNT9BO14905 357 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 LANCL1O43813 399 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 CA11O75493 328 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 NXPH2O95156 264 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 GSTP1P09211 210 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 IL7P13232 177 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 GABRR1P24046 479 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 CCL8P80075 99 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 TLE4Q04727 773 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 ZNF146Q15072 292 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 PNLIPRP3Q17RR3 467 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 SP5Q6BEB4 398 aaPredicted RBP12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 C16orf87Q6PH81 154 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 Q6ZTK2 550 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 FAM90A1Q86YD7 464 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 LYSMD2Q8IV50 215 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 OR52I2Q8NH67 350 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 GPX8Q8TED1 209 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 GCDHQ92947 438 aaPredicted RBP12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 SEH1LQ96EE3 360 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 EGLN1Q9GZT9 426 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 WDR13Q9H1Z4 485 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 SEBOXQ9HB31 216 aaPredicted RBP12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 SCPEP1Q9HB40 452 aa12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 ELF5Q9UKW6 265 aaPredicted RBP12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 RBMX2Q9Y388 322 aaKnown RBP12.41□□□□□ -0.42
SHKBP1-211ENST00000595945 ARID1AO14497 2285 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 hCG_1807616A0A1W2PRN6 198 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 MEIOCA2RUB1 952 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 TMEM235A6NFC5 223 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 TPD52L2O43399 206 aaKnown RBP12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 PDCD6O75340 191 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 GNB3P16520 340 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 GLRA1P23415 457 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 PRSS3P35030 304 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 HOXA4Q00056 320 aaPredicted RBP12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 ARL6IP1Q15041 203 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 SPIN3Q5JUX0 258 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 STEAP3Q658P3 488 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 OLFML2AQ68BL7 652 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 OR8H2Q8N162 312 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 OR11L1Q8NGX0 322 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 THAP7Q9BT49 309 aaPredicted RBP12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 SAP30LQ9HAJ7 183 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 ABCB10Q9NRK6 738 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 DECR2Q9NUI1 292 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 RNF7Q9UBF6 113 aa12.4□□□□□ -0.42
SHKBP1-211ENST00000595945 KIAA2026Q5HYC2 2103 aa12.4□□□□□ -0.43
SHKBP1-211ENST00000595945 A0A1W2PQ09 198 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 SERPINE3A8MV23 424 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 IFNL4K9M1U5 179 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 SSX5O60225 188 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 KNG1P01042 644 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 GLAP06280 429 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 FUT3P21217 361 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 RBMXP38159 391 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 SNU13P55769 128 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 GUCA2AQ02747 115 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 PDCD1Q15116 288 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 SMIM21Q3B7S5 101 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 HACD4Q5VWC8 232 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 C6orf201Q7Z4U5 140 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 TGIF2LYQ8IUE0 185 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 FCAMRQ8WWV6 532 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 IGFBPL1Q8WX77 278 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 NEDD4LQ96PU5 975 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 PLEKHF2Q9H8W4 249 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 UBTD1Q9HAC8 227 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 ANAPC10Q9UM13 185 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 PPP1R3CQ9UQK1 317 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 DOCK11Q5JSL3 2073 aa12.39□□□□□ -0.43
SHKBP1-211ENST00000595945 TRAV24A0A0B4J272 114 aa12.38□□□□□ -0.43
SHKBP1-211ENST00000595945 A1L4Q6 167 aa12.38□□□□□ -0.43
SHKBP1-211ENST00000595945 H3BUI4 141 aa12.38□□□□□ -0.43
SHKBP1-211ENST00000595945 H7C417 338 aa12.38□□□□□ -0.43
SHKBP1-211ENST00000595945 OR7C1O76099 320 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-211ENST00000595945 CYB5R3P00387 301 aaPredicted RBP12.38□□□□□ -0.43
SHKBP1-211ENST00000595945 HPXP02790 462 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms