RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SUMF2Q8NBJ7 301 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 FBXO17Q96EF6 278 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 BORCS8Q96FH0 119 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 REEP6Q96HR9 211 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 RBM24Q9BX46 236 aaKnown RBP11.49□□□□□ -0.57
VRK3-209ENST00000594948 ULBP2Q9BZM5 246 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 SLC25A31Q9H0C2 315 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 SH3BGRL3Q9H299 93 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 RARRES3Q9UL19 164 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 TNRC6BQ9UPQ9 1833 aaKnown RBP11.49□□□□□ -0.57
VRK3-209ENST00000594948 IGKV1-27A0A075B6S5 117 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 TRDCB7Z8K6 153 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 SYNGR3O43761 229 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 PDCD6O75340 191 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 CLN5O75503 358 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 TIAF1O95411 115 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 DBHP09172 617 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 OPRM1P35372 400 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 PPP1CCP36873 323 aaKnown RBP11.49□□□□□ -0.57
VRK3-209ENST00000594948 FHITP49789 147 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 DSCR4P56555 118 aaPredicted RBP11.49□□□□□ -0.57
VRK3-209ENST00000594948 HERV-K104P61576 105 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 POLR2GP62487 172 aaKnown RBP eCLIP11.49□□□□□ -0.57
VRK3-209ENST00000594948 NHLH2Q02577 135 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 EXT1Q16394 746 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 PHLDA2Q53GA4 152 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 SP5Q6BEB4 398 aaPredicted RBP11.49□□□□□ -0.57
VRK3-209ENST00000594948 CLEC9AQ6UXN8 241 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 ZNF574Q6ZN55 896 aaPredicted RBP11.49□□□□□ -0.57
VRK3-209ENST00000594948 TMEM182Q6ZP80 229 aaPredicted RBP11.49□□□□□ -0.57
VRK3-209ENST00000594948 HSD17B11Q8NBQ5 300 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 OR10AD1Q8NGE0 317 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 OR14L1PQ8NHC6 308 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 CD300LFQ8TDQ1 290 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 ZNF385AQ96PM9 386 aaKnown RBP11.49□□□□□ -0.57
VRK3-209ENST00000594948 OR6C1Q96RD1 312 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 SF3B5Q9BWJ5 86 aaKnown RBP11.49□□□□□ -0.57
VRK3-209ENST00000594948 KIAA1456Q9P272 454 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 FBXO7Q9Y3I1 522 aa11.49□□□□□ -0.57
VRK3-209ENST00000594948 REV3LO60673 3130 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 GON4LQ3T8J9 2241 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 A0A1W2PPE2 198 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 FAM230AA0A1W2PPH8 454 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 PHF1O43189 567 aaPredicted RBP11.48□□□□□ -0.57
VRK3-209ENST00000594948 HSPA12AO43301 675 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 PPIHO43447 177 aaKnown RBP11.48□□□□□ -0.57
VRK3-209ENST00000594948 SPRY1O43609 319 aaPredicted RBP11.48□□□□□ -0.57
VRK3-209ENST00000594948 ANGPTL7O43827 346 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 OR2C1O95371 312 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 DAOP14920 347 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 FUT6P51993 359 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 FXYD4P59646 89 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 RPS23P62266 143 aaKnown RBP11.48□□□□□ -0.57
VRK3-209ENST00000594948 MALLQ13021 153 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 ADAM5Q6NVV9 412 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.48□□□□□ -0.57
VRK3-209ENST00000594948 FBXL14Q8N1E6 418 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 OR5L1Q8NGL2 311 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 OR1F12Q8NHA8 337 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 DNASE2BQ8WZ79 361 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 MUCL1Q96DR8 90 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 TMEM56Q96MV1 263 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 PLEKHF2Q9H8W4 249 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 TMEM56-RWDD3S4R434 201 aa11.48□□□□□ -0.57
VRK3-209ENST00000594948 LOC102723996A0A087X1L8 192 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 CLEC18AA5D8T8 446 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A10PA6NDY2 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A18PA6NE21 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A16PA6NEW6 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 OR6C6A6NF89 314 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 RBFOX3A6NFN3 312 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A20PA6NIJ5 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A8PA6NJQ4 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A7PA6NKC0 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A22PA8MWA6 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A12PA8MX19 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A5PA8MXJ8 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A23PA8MXZ1 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 ZNF732B4DXR9 585 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 C1QL1O75973 258 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 IGHV2-70P01814 119 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 ARG1P05089 322 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A15PP0C7V4 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A13PP0C7W8 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A14PP0C7W9 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM90A24PP0C7X0 464 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 LIFP15018 202 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 NQO2P16083 231 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 HOXA5P20719 270 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 CHAF1BQ13112 559 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 DPPA3Q6W0C5 159 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 SLC35G3Q8N808 338 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 ZIC4Q8N9L1 334 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 CLEC18CQ8NCF0 446 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 GNPNAT1Q96EK6 184 aaPredicted RBP11.47□□□□□ -0.57
VRK3-209ENST00000594948 TMEM222Q9H0R3 208 aa11.47□□□□□ -0.57
VRK3-209ENST00000594948 RYDENQ9NUL5 291 aaKnown RBP11.47□□□□□ -0.57
VRK3-209ENST00000594948 FAM86C1Q9NVL1 165 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms