RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 TMPRSS12Q86WS5 348 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 CADM4Q8NFZ8 388 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 TMEM239Q8WW34 195 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 ZMYND19Q96E35 227 aaPredicted RBP3.84□□□□□ -1.8
LRIT3-202ENST00000594814 FBXO17Q96EF6 278 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 DCBLD2Q96PD2 775 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 SLC6A7Q99884 636 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 FAAP24Q9BTP7 215 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 G6PC3Q9BUM1 346 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 CLEC5AQ9NY25 188 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 MRPL15Q9P015 296 aaKnown RBP3.84□□□□□ -1.8
LRIT3-202ENST00000594814 ZNF230Q9UIE0 474 aaPredicted RBP3.84□□□□□ -1.8
LRIT3-202ENST00000594814 WSB1Q9Y6I7 421 aa3.84□□□□□ -1.8
LRIT3-202ENST00000594814 LOC102723971A0A1B0GUV8 181 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 TRAPPC2LH3BP13 241 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 C15orf65H3BRN8 121 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 YPEL1O60688 119 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 OR2J2O76002 312 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 HRASP01112 189 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ISG15P05161 165 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 MMP7P09237 267 aaPredicted RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 TCN2P20062 427 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 CD1BP29016 333 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 CNN1P51911 297 aaKnown RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ERVFRD-1P60508 538 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 LCN6P62502 163 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ZNF616Q08AN1 781 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 PMPCAQ10713 525 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FOXF1Q12946 379 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 INSL4Q14641 139 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ACKR1Q16570 336 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 PRSS53Q2L4Q9 553 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 SMIM21Q3B7S5 101 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 C4orf48Q5BLP8 95 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 MRPL54Q6P161 138 aaKnown RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 Q6ZS52 159 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 CYP2G1PQ6ZSU1 146 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 LHFPL1Q86WI0 220 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 C17orf64Q86WR6 236 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 OR5A2Q8NGI9 324 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 DOK4Q8TEW6 326 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 SKA2Q8WVK7 121 aaPredicted RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 NEIL2Q969S2 332 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 SPSB1Q96BD6 273 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ZNF48Q96MX3 618 aaPredicted RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 YPEL2Q96QA6 119 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 HIST1H2AAQ96QV6 131 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 DIRC2Q96SL1 478 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 MCHR1Q99705 422 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 SPIN2AQ99865 258 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 GABRG3Q99928 467 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 SPIN2BQ9BPZ2 258 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ATG101Q9BSB4 218 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 HCAR1Q9BXC0 346 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 SDF2L1Q9HCN8 221 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 B3GAT1Q9P2W7 334 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FBXL17Q9UF56 701 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 MRPS28Q9Y2Q9 187 aaKnown RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ATMQ13315 3056 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 C4orf47A7E2U8 309 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ZNF705GA8MUZ8 300 aaPredicted RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 H0YIZ8 118 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 MTX2O75431 263 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 PFN1P07737 140 aaKnown RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ZGLP1P0C6A0 271 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ZNF43P17038 809 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 IGFBP3P17936 291 aaPredicted RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 CD22P20273 847 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 PPOXP50336 477 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 NR0B2Q15466 257 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 EXT1Q16394 746 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ARHGAP11BQ3KRB8 267 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ZNF260Q3ZCT1 412 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 OCIAD2Q56VL3 154 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FAM162BQ5T6X4 162 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FAM27D1Q5T7N8 215 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ZNF440Q8IYI8 595 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 APCDD1LQ8NCL9 501 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 OR4C5Q8NGB2 326 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 OR5K2Q8NHB8 316 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FNDC9Q8TBE3 224 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FAM222BQ8WU58 562 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 SLAMF6Q96DU3 332 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 REEP6Q96HR9 211 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 GAL3ST4Q96RP7 486 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 PSMG3Q9BT73 122 aaPredicted RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 NUDT9Q9BW91 350 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 CHST6Q9GZX3 395 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 TMEM106BQ9NUM4 274 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 CRIM1Q9NZV1 1036 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 GSKIPQ9P0R6 139 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 ZNF443Q9Y2A4 671 aaPredicted RBP3.83□□□□□ -1.8
LRIT3-202ENST00000594814 KIAA1549LQ6ZVL6 1849 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 PRAMEF27A3QJZ7 478 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FAM90A18PA6NE21 464 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FAM90A16PA6NEW6 464 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FAM90A7PA6NKC0 464 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 OR4C45A6NMZ5 311 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FAM90A9PA6NNJ1 464 aa3.83□□□□□ -1.8
LRIT3-202ENST00000594814 FAM90A22PA8MWA6 464 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms