RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ZNF616Q08AN1 781 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 PDCD1Q15116 288 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 PIGYQ3MUY2 71 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 ABCA11PQ4W5N1 156 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 PHLDA2Q53GA4 152 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 FAM24BQ8N5W8 94 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 WFDC1Q9HC57 220 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 GEMIN2O14893 280 aaKnown RBP14.32□□□□□ -0.12
LIG1-206ENST00000594067 SYNGR3O43761 229 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 DIRAS3O95661 229 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 MBPP02686 304 aaPredicted RBP14.32□□□□□ -0.12
LIG1-206ENST00000594067 ARG1P05089 322 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 NQO2P16083 231 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 ZNF468Q5VIY5 522 aaPredicted RBP14.32□□□□□ -0.12
LIG1-206ENST00000594067 LYSMD4Q5XG99 296 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 RTN4IP1Q8WWV3 396 aaPredicted RBP14.32□□□□□ -0.12
LIG1-206ENST00000594067 EDARADDQ8WWZ3 215 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 BORCS8Q96FH0 119 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 EIF5A2Q9GZV4 153 aaKnown RBP14.32□□□□□ -0.12
LIG1-206ENST00000594067 WDR54Q9H977 334 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 CRLF2Q9HC73 371 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 TINAGQ9UJW2 476 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 KCNIP3Q9Y2W7 256 aa14.32□□□□□ -0.12
LIG1-206ENST00000594067 CCDC187A0A096LP49 1063 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 CCDC85CA6NKD9 419 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 XRCC2O43543 280 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 CHATP28329 748 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 SUCLG1P53597 346 aaKnown RBP14.31□□□□□ -0.12
LIG1-206ENST00000594067 TMEM187Q14656 261 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 RAB35Q15286 201 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 ADAM5Q6NVV9 412 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 LYZL2Q7Z4W2 148 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 CCDC54Q8NEL0 328 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 NAA60Q9H7X0 242 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 HS3ST3B1Q9Y662 390 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 IGKV1-12A0A0C4DH73 117 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 CLN5O75503 358 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 IGKV1D-12P01611 117 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 FGF5P12034 268 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 B4GALT1P15291 398 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 RBP2P50120 134 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 RAC1P63000 192 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 CNN3Q15417 329 aaKnown RBP14.31□□□□□ -0.12
LIG1-206ENST00000594067 HLA-BQ31612 363 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 SLC22A25Q6T423 547 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 YRDCQ86U90 279 aaKnown RBP14.31□□□□□ -0.12
LIG1-206ENST00000594067 OR1F12Q8NHA8 337 aa14.31□□□□□ -0.12
LIG1-206ENST00000594067 INTS12Q96CB8 462 aaKnown RBP14.31□□□□□ -0.12
LIG1-206ENST00000594067 TXNL1O43396 289 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 C1QL1O75973 258 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 ZNF32P17041 273 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 LMO1P25800 156 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 S100PP25815 95 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 SULT1A1P50225 295 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 RPS19BP1Q86WX3 136 aaKnown RBP14.3□□□□□ -0.12
LIG1-206ENST00000594067 OR10AD1Q8NGE0 317 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 OR5L1Q8NGL2 311 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 MALSU1Q96EH3 234 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 ALKBH3Q96Q83 286 aaPredicted RBP14.3□□□□□ -0.12
LIG1-206ENST00000594067 ZNF700Q9H0M5 742 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 WNT16Q9UBV4 365 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 HSF4Q9ULV5 492 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 UMAD1C9J7I0 102 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 E5RGE8 158 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 KLF7O75840 302 aaPredicted RBP14.3□□□□□ -0.12
LIG1-206ENST00000594067 IGHV2-70P01814 119 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 KLK3P07288 261 aaPredicted RBP14.3□□□□□ -0.12
LIG1-206ENST00000594067 OR2B8PP59922 312 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 BATF2Q8N1L9 274 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 IFI44Q8TCB0 444 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 GINS3Q9BRX5 216 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 LUZP4Q9P127 313 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 NSG2Q9Y328 171 aa14.3□□□□□ -0.12
LIG1-206ENST00000594067 CCL4P13236 92 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 DTYMKP23919 212 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 HTR5AP47898 357 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 CAMLGP49069 296 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 EXT1Q16394 746 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 CDCP2Q5VXM1 449 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 FBXL14Q8N1E6 418 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 GPR137CQ8N3F9 429 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 OR11L1Q8NGX0 322 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 A0A0G2JMM0 328 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 A0A1W2PPB8 328 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 A0A1W2PPE2 198 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 A0A1W2PRS3 328 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 KIR3DP1A8MWS1 328 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 AP4M1O00189 453 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 NRASP01111 189 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 EIF2S3P41091 472 aaKnown RBP14.29□□□□□ -0.12
LIG1-206ENST00000594067 OR1J1Q8NGS3 322 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 SH2D2AQ9NP31 389 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 C19orf12Q9NSK7 152 aa14.29□□□□□ -0.12
LIG1-206ENST00000594067 CBR3O75828 277 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 CYC1P08574 325 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 P2RY1P47900 373 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 RHEBQ15382 184 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 ACER2Q5QJU3 275 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 LHFPL2Q6ZUX7 228 aa14.28□□□□□ -0.12
LIG1-206ENST00000594067 OR52M1Q8NGK5 317 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms