RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ATP6V1E1P36543 226 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 RAB13P51153 203 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 OR12D2P58182 307 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 NANOS3P60323 173 aaKnown RBP11.9□□□□□ -0.5
PNKP-202ENST00000593706 ERVK11-1P61568 191 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 UBE2V2Q15819 145 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 ODF4Q2M2E3 257 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 ZBTB49Q6ZSB9 765 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 CALHM1Q8IU99 346 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 C11orf42Q8N5U0 333 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 ASCC1Q8N9N2 400 aaKnown RBP11.9□□□□□ -0.5
PNKP-202ENST00000593706 OR13D1Q8NGV5 346 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 OR2G2Q8NGZ5 317 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 CHST5Q9GZS9 411 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 FAM118AQ9NWS6 357 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 FRRS1LQ9P0K9 344 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 TBL2Q9Y4P3 447 aaKnown RBP11.9□□□□□ -0.5
PNKP-202ENST00000593706 GMPPBQ9Y5P6 360 aa11.9□□□□□ -0.5
PNKP-202ENST00000593706 IGKV1-27A0A075B6S5 117 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 MEX3AA1L020 520 aaKnown RBP11.89□□□□□ -0.51
PNKP-202ENST00000593706 MEGF11A6BM72 1044 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 F2RL2O00254 374 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 SYT7O43581 403 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 IGHA1P01876 353 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 TK1P04183 234 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 ISG15P05161 165 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 UBCP0CG48 685 aaKnown RBP11.89□□□□□ -0.51
PNKP-202ENST00000593706 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
PNKP-202ENST00000593706 SSX2Q16385 188 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 FAM220AQ7Z4H9 259 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 KCTD20Q7Z5Y7 419 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 RDH10Q8IZV5 341 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 Q8N2B8 174 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 ACBD7Q8N6N7 88 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 CCDC54Q8NEL0 328 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 PELI1Q96FA3 418 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 CDCA4Q9BXL8 241 aa11.89□□□□□ -0.51
PNKP-202ENST00000593706 LOC100130705A0A1B0GUX0 176 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 A0A1W2PRX2 142 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 FAM90A8PA6NJQ4 464 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 WBP4O75554 376 aaKnown RBP11.88□□□□□ -0.51
PNKP-202ENST00000593706 ALDOBP05062 364 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 CD33P20138 364 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 VDAC2P45880 294 aaPredicted RBP11.88□□□□□ -0.51
PNKP-202ENST00000593706 EDDM3BP56851 147 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 IL24Q13007 206 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 ZSCAN26Q16670 478 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 CCBE1Q6UXH8 406 aaPredicted RBP11.88□□□□□ -0.51
PNKP-202ENST00000593706 GDPD3Q7L5L3 318 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 C10orf35Q96D05 121 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 MALSU1Q96EH3 234 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 ADAT3Q96EY9 351 aaPredicted RBP11.88□□□□□ -0.51
PNKP-202ENST00000593706 RDH12Q96NR8 316 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 PKIBQ9C010 78 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 MRPS18AQ9NVS2 196 aaKnown RBP11.88□□□□□ -0.51
PNKP-202ENST00000593706 MYRFQ9Y2G1 1151 aa11.88□□□□□ -0.51
PNKP-202ENST00000593706 IGKV1-9A0A0C4DH69 117 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 DAPL1A0PJW8 107 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 A6NDX4 124 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 OR4C45A6NMZ5 311 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 C17orf98A8MV24 154 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 ODF3BA8MYP8 253 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 H3BSH0 61 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 MPZL2O60487 215 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 RBP4P02753 201 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 ZNF728P0DKX0 622 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 CCR9P51686 369 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 COL10A1Q03692 680 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 GALEQ14376 348 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 TMEM95Q3KNT9 176 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 FOXB2Q5VYV0 432 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 ZNF626Q68DY1 528 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 ANGPTL5Q86XS5 388 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 EGFL6Q8IUX8 553 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 SYS1Q8N2H4 156 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 OR10AC1Q8NH08 325 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 PP6455Q8WZ26 134 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 JAM3Q9BX67 310 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 PLEKHA1Q9HB21 404 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 SMPD3Q9NY59 655 aaPredicted RBP11.87□□□□□ -0.51
PNKP-202ENST00000593706 HILPDAQ9Y5L2 63 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 TENM3Q9P273 2699 aa11.87□□□□□ -0.51
PNKP-202ENST00000593706 SNTNA6NMZ2 147 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 ADARB2-AS1A8MUL3 147 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 F8VVB4 439 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 F8VWA3 439 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 IGHV1-8P0DP01 117 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 PF4V1P10720 104 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 DLX6P56179 175 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 ACTA2P62736 377 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 ACTG2P63267 376 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 SLC34A1Q06495 639 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 RAB40BQ12829 278 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 UTS2BQ765I0 119 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 OR51A4Q8NGJ6 313 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 NDNFQ8TB73 568 aa11.86□□□□□ -0.51
PNKP-202ENST00000593706 TRMT10AQ8TBZ6 339 aaKnown RBP11.86□□□□□ -0.51
PNKP-202ENST00000593706 C4orf36Q96KX1 117 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms