RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 OR5M11Q96RB7 305 aa19.22■□□□□ 0.67
LSM4-202ENST00000593564 FAM90A22PA8MWA6 464 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 INMTO95050 263 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 IGHA1P01876 353 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 JUNBP17275 347 aaPredicted RBP19.21■□□□□ 0.67
LSM4-202ENST00000593564 AZGP1P25311 298 aaKnown RBP19.21■□□□□ 0.67
LSM4-202ENST00000593564 PEX2P28328 305 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 HTR1FP30939 366 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 VDAC2P45880 294 aaPredicted RBP19.21■□□□□ 0.67
LSM4-202ENST00000593564 SLC34A1Q06495 639 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 GRK1Q15835 563 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 ARSJQ5FYB0 599 aaPredicted RBP19.21■□□□□ 0.67
LSM4-202ENST00000593564 ZBTB49Q6ZSB9 765 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 OR52N4Q8NGI2 321 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 NDNFQ8TB73 568 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 MRAPQ8TCY5 172 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 ADI1Q9BV57 179 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 CLEC7AQ9BXN2 247 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 GABARAPL1Q9H0R8 117 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 TMEM133Q9H2Q1 129 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 IL36RNQ9UBH0 155 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 ENOPH1Q9UHY7 261 aa19.21■□□□□ 0.67
LSM4-202ENST00000593564 GABRR1P24046 479 aa19.2■□□□□ 0.66
LSM4-202ENST00000593564 ZNF91Q05481 1191 aa19.2■□□□□ 0.66
LSM4-202ENST00000593564 TPRX1Q8N7U7 411 aa19.2■□□□□ 0.66
LSM4-202ENST00000593564 DNAAF1Q8NEP3 725 aa19.2■□□□□ 0.66
LSM4-202ENST00000593564 PP6455Q8WZ26 134 aa19.2■□□□□ 0.66
LSM4-202ENST00000593564 SGCDQ92629 289 aa19.2■□□□□ 0.66
LSM4-202ENST00000593564 CHST6Q9GZX3 395 aa19.2■□□□□ 0.66
LSM4-202ENST00000593564 TRBV2A0A0J9YWF9 115 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 H3BUI4 141 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 MGST3O14880 152 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 PSPNO60542 156 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 RBP2P50120 134 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 LOXL3P58215 753 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 ZNF146Q15072 292 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 TMEM95Q3KNT9 176 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 ZDHHC13Q8IUH4 622 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 PRSS35Q8N3Z0 413 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 OR10H4Q8NGA5 316 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 PHF21AQ96BD5 680 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 OCSTAMPQ9BR26 566 aa19.19■□□□□ 0.66
LSM4-202ENST00000593564 RBFOX1Q9NWB1 397 aaKnown RBP19.19■□□□□ 0.66
LSM4-202ENST00000593564 LOC107986453A0A1B0GWG9 222 aa19.18■□□□□ 0.66
LSM4-202ENST00000593564 APOL3O95236 402 aa19.18■□□□□ 0.66
LSM4-202ENST00000593564 UBCP0CG48 685 aaKnown RBP19.18■□□□□ 0.66
LSM4-202ENST00000593564 NPBWR2P48146 333 aa19.18■□□□□ 0.66
LSM4-202ENST00000593564 ATP1B3P54709 279 aa19.18■□□□□ 0.66
LSM4-202ENST00000593564 IL18R1Q13478 541 aa19.18■□□□□ 0.66
LSM4-202ENST00000593564 FAM58AQ8N1B3 248 aa19.18■□□□□ 0.66
LSM4-202ENST00000593564 OR4P4Q8NGL7 312 aa19.18■□□□□ 0.66
LSM4-202ENST00000593564 AURKAIP1Q9NWT8 199 aaPredicted RBP19.18■□□□□ 0.66
LSM4-202ENST00000593564 UBE2J1Q9Y385 318 aaPredicted RBP19.18■□□□□ 0.66
LSM4-202ENST00000593564 ALX3O95076 343 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 CYB5AP00167 134 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 BCL3P20749 454 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 HTR1DP28221 377 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 ERP29P30040 261 aaKnown RBP19.17■□□□□ 0.66
LSM4-202ENST00000593564 OR3A1P47881 315 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 ISL1P61371 349 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 CD83Q01151 205 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 SPIN3Q5JUX0 258 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 C16orf82Q7Z2V1 217 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 CIB1Q99828 191 aa19.17■□□□□ 0.66
LSM4-202ENST00000593564 IGKV1-9A0A0C4DH69 117 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 ENTPD6O75354 484 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 MMP23AO75900 390 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 FASP25445 335 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 DUSP1P28562 367 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 ATP6V1E1P36543 226 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 KIR3DL2P43630 455 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 POU3F4P49335 361 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 P2RX3P56373 397 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 TMED1Q13445 227 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 FAM220AQ7Z4H9 259 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 TRAPPC6BQ86SZ2 158 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 RDH10Q8IZV5 341 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 WFDC9Q8NEX5 89 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 OR5AU1Q8NGC0 362 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 OR8J1Q8NGP2 316 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 RNF166Q96A37 237 aaPredicted RBP19.16■□□□□ 0.66
LSM4-202ENST00000593564 ADAT3Q96EY9 351 aaPredicted RBP19.16■□□□□ 0.66
LSM4-202ENST00000593564 GLS2Q9UI32 602 aa19.16■□□□□ 0.66
LSM4-202ENST00000593564 PRKACAP17612 351 aa19.15■□□□□ 0.66
LSM4-202ENST00000593564 PRKACBP22694 351 aa19.15■□□□□ 0.66
LSM4-202ENST00000593564 POLR2IP36954 125 aaKnown RBP19.15■□□□□ 0.66
LSM4-202ENST00000593564 MTCP1P56278 107 aa19.15■□□□□ 0.66
LSM4-202ENST00000593564 CDC42P60953 191 aa19.15■□□□□ 0.66
LSM4-202ENST00000593564 UTS2BQ765I0 119 aa19.15■□□□□ 0.66
LSM4-202ENST00000593564 AKR1E2Q96JD6 320 aa19.15■□□□□ 0.66
LSM4-202ENST00000593564 LIN7BQ9HAP6 207 aa19.15■□□□□ 0.66
LSM4-202ENST00000593564 DPM3Q9P2X0 92 aa19.15■□□□□ 0.66
LSM4-202ENST00000593564 GNG8Q9UK08 70 aa19.15■□□□□ 0.66
LSM4-202ENST00000593564 BDH1Q02338 343 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 ZNF85Q03923 595 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 TP53I3Q53FA7 332 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 TMEM244Q5VVB8 128 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 FOXB2Q5VYV0 432 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 OR52W1Q6IF63 320 aa19.14■□□□□ 0.65
LSM4-202ENST00000593564 LHFPL2Q6ZUX7 228 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms