RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 OR14J1Q9UGF5 321 aa12.62□□□□□ -0.39
TRIM47-206ENST00000592942 SOX21Q9Y651 276 aaPredicted RBP12.62□□□□□ -0.39
TRIM47-206ENST00000592942 TMEM82A0PJX8 343 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 K7N7A8 449 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 GABRPO00591 440 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 SC5DO75845 299 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 TK1P04183 234 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 OCMP0CE72 109 aaPredicted RBP12.61□□□□□ -0.39
TRIM47-206ENST00000592942 SMIM18P0DKX4 95 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 NDUFB7P17568 137 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 EPHA1P21709 976 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 DUSP1P28562 367 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
TRIM47-206ENST00000592942 COL10A1Q03692 680 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 TPBGQ13641 420 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 ZNF146Q15072 292 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 TBCEQ15813 527 aaPredicted RBP12.61□□□□□ -0.39
TRIM47-206ENST00000592942 LYPD6Q86Y78 171 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 Q8IYB0 196 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 BCL6BQ8N143 479 aaPredicted RBP12.61□□□□□ -0.39
TRIM47-206ENST00000592942 Q8N7P7 452 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 Q8NFD4 153 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 PXT1Q8NFP0 134 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 EMG1Q92979 244 aaKnown RBP12.61□□□□□ -0.39
TRIM47-206ENST00000592942 PPIL3Q9H2H8 161 aaKnown RBP12.61□□□□□ -0.39
TRIM47-206ENST00000592942 ISYNA1Q9NPH2 558 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 TMEM138Q9NPI0 162 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 ZNF69Q9UC07 566 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 NUP50Q9UKX7 468 aa12.61□□□□□ -0.39
TRIM47-206ENST00000592942 IGHV3OR16-10A0A075B7F0 116 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 CHRM2P08172 466 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 TMEM225BP0DP42 221 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 FSTP19883 344 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 ACSM3Q53FZ2 586 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 C17orf107Q6ZR85 190 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 SATL1Q86VE3 508 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 C11orf42Q8N5U0 333 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 TMEM185AQ8NFB2 350 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 C22orf15Q8WYQ4 148 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 H1FXQ92522 213 aaKnown RBP12.6□□□□□ -0.39
TRIM47-206ENST00000592942 RHOFQ9HBH0 211 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 NEK6Q9HC98 313 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 NOX4Q9NPH5 578 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 C19orf12Q9NSK7 152 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 FOXJ3Q9UPW0 622 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 SF3B6Q9Y3B4 125 aaKnown RBP12.6□□□□□ -0.39
TRIM47-206ENST00000592942 KPTNQ9Y664 436 aa12.6□□□□□ -0.39
TRIM47-206ENST00000592942 CENPVL3A0A0U1RRI6 287 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 PSPNO60542 156 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 TOX4O94842 621 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 HAND1O96004 215 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 CYB5AP00167 134 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 PRKACAP17612 351 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 LMO1P25800 156 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 BDKRB2P30411 391 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 PTGFRP43088 359 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 EMX1Q04741 257 aaPredicted RBP12.59□□□□□ -0.39
TRIM47-206ENST00000592942 ARMCX4Q5H9R4 360 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 FAM27D1Q5T7N8 215 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 LIPKQ5VXJ0 399 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 TMEM200BQ69YZ2 307 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 ELP2Q6IA86 826 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 Q6P435 159 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 TMEM91Q6ZNR0 172 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 MS4A15Q8N5U1 240 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 PCGF1Q9BSM1 259 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 MRPS26Q9BYN8 205 aaKnown RBP12.59□□□□□ -0.39
TRIM47-206ENST00000592942 FAM234AQ9H0X4 552 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 ACOT13Q9NPJ3 140 aa12.59□□□□□ -0.39
TRIM47-206ENST00000592942 MAGEB3O15480 346 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 VENTXO95231 258 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 CPEP16870 476 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 ZNF93P35789 620 aaPredicted RBP12.58□□□□□ -0.4
TRIM47-206ENST00000592942 OR3A4PP47883 348 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 SNU13P55769 128 aaKnown RBP12.58□□□□□ -0.4
TRIM47-206ENST00000592942 DLX1P56177 255 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 PPP3R1P63098 170 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 MLLT11Q13015 90 aaPredicted RBP12.58□□□□□ -0.4
TRIM47-206ENST00000592942 SPIN3Q5JUX0 258 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 DDI2Q5TDH0 399 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 C1orf122Q6ZSJ8 110 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 C9orf139Q6ZV77 190 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 OR4M1Q8NGD0 313 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 TNFAIP8L1Q8WVP5 186 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 FCGR1BQ92637 280 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 TNFRSF14Q92956 283 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 SNX22Q96L94 193 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 ZNF48Q96MX3 618 aaPredicted RBP12.58□□□□□ -0.4
TRIM47-206ENST00000592942 MGLLQ99685 303 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 SLC6A7Q99884 636 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 TMED9Q9BVK6 235 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 GSTK1Q9Y2Q3 226 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 STAB1Q9NY15 2570 aa12.58□□□□□ -0.4
TRIM47-206ENST00000592942 TRBV23-1A0A0A0MS06 115 aa12.57□□□□□ -0.4
TRIM47-206ENST00000592942 TRAV40A0A0B4J280 105 aa12.57□□□□□ -0.4
TRIM47-206ENST00000592942 CDRT1O95170 752 aa12.57□□□□□ -0.4
TRIM47-206ENST00000592942 OR2H2O95918 312 aa12.57□□□□□ -0.4
TRIM47-206ENST00000592942 HSMCR30P0CW71 290 aa12.57□□□□□ -0.4
TRIM47-206ENST00000592942 CD37P11049 281 aa12.57□□□□□ -0.4
TRIM47-206ENST00000592942 JUNBP17275 347 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms