RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 TAS2R43P59537 309 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 RPL31P62899 125 aaKnown RBP11.45□□□□□ -0.58
CLIP3-205ENST00000592017 PPP3R1P63098 170 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 SLC9A3R2Q15599 337 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 KISS1Q15726 138 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 AWAT1Q58HT5 328 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 DMKNQ6E0U4 476 aaPredicted RBP11.45□□□□□ -0.58
CLIP3-205ENST00000592017 SATL1Q86VE3 508 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 FAM58AQ8N1B3 248 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 KIR3DL3Q8N743 410 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 C3orf56Q8N813 242 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 OR51A2Q8NGJ7 313 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 GPER1Q99527 375 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 NKX3-1Q99801 234 aaPredicted RBP11.45□□□□□ -0.58
CLIP3-205ENST00000592017 ANKRD60Q9BZ19 345 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 FAM192AQ9GZU8 254 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 FKBP14Q9NWM8 211 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 MGAM2Q2M2H8 2515 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 A0A1W2PRD5 423 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 A0A1W2PRF3 423 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 A0A1W2PRM7 423 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 CLDN34H7C241 214 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 IGHV1-69P01742 117 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 TK1P04183 234 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 CHRM2P08172 466 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 HKR1P10072 659 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 MYF6P23409 242 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 GABRR1P24046 479 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 HSPA13P48723 471 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 EDDM3BP56851 147 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 KLRD1Q13241 179 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 BLMHQ13867 455 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 DOC2BQ14184 412 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 EDDM3AQ14507 147 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 DEFB112Q30KQ8 113 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 ZNF485Q8NCK3 441 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 SGCDQ92629 289 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 TAF15Q92804 592 aaKnown RBP eCLIP11.44□□□□□ -0.58
CLIP3-205ENST00000592017 MYDGFQ969H8 173 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 ORAI1Q96D31 301 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 CPNE2Q96FN4 548 aaPredicted RBP11.44□□□□□ -0.58
CLIP3-205ENST00000592017 PGLYRP3Q96LB9 341 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 CNBD2Q96M20 576 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 CHST6Q9GZX3 395 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 PAK1IP1Q9NWT1 392 aaPredicted RBP11.44□□□□□ -0.58
CLIP3-205ENST00000592017 GSTK1Q9Y2Q3 226 aa11.44□□□□□ -0.58
CLIP3-205ENST00000592017 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
CLIP3-205ENST00000592017 SIRPB1O00241 398 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 KDM4BO94953 1096 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 RNASE1P07998 156 aaKnown RBP11.43□□□□□ -0.58
CLIP3-205ENST00000592017 CELP19835 753 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 ZP1P60852 638 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 YIF1BQ5BJH7 314 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 ASPHD2Q6ICH7 369 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 CRIP3Q6Q6R5 217 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 GDPD3Q7L5L3 318 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 Q8N7P7 452 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 NANOGP1Q8N7R0 232 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 OR52N4Q8NGI2 321 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 TNFAIP8L1Q8WVP5 186 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 ZDHHC16Q969W1 377 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 MND1Q9BWT6 205 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 FAM234AQ9H0X4 552 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 PRDM13Q9H4Q3 707 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 HMG20AQ9NP66 347 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 GLS2Q9UI32 602 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 PCDHGB5Q9Y5G0 923 aa11.43□□□□□ -0.58
CLIP3-205ENST00000592017 TRBV5-5A0A0J9YX44 114 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 A0A1W2PPH5 198 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 A0A1W2PPK0 400 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 TMEM82A0PJX8 343 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 K7N7A8 449 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 M0R1W7 72 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 GABRPO00591 440 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 ZNF737O75373 536 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 ALX3O95076 343 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 CCL3L1P16619 93 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 BPIFB3P59826 476 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 RIPK1Q13546 671 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 ZNF273Q14593 569 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 GRK1Q15835 563 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 Q499Y3 187 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 SPIN3Q5JUX0 258 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 DDI2Q5TDH0 399 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 SLC25A28Q96A46 364 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 DMRTB1Q96MA1 342 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 OR14A2Q96R54 314 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 CCDC90BQ9GZT6 254 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 METTL8Q9H825 291 aaKnown RBP11.42□□□□□ -0.58
CLIP3-205ENST00000592017 ZMAT3Q9HA38 289 aaKnown RBP11.42□□□□□ -0.58
CLIP3-205ENST00000592017 EXOSC4Q9NPD3 245 aaKnown RBP11.42□□□□□ -0.58
CLIP3-205ENST00000592017 TNFRSF19Q9NS68 423 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 CKLFQ9UBR5 152 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 TPRKBQ9Y3C4 175 aa11.42□□□□□ -0.58
CLIP3-205ENST00000592017 A0A0U1RQK1 487 aa11.41□□□□□ -0.58
CLIP3-205ENST00000592017 RNASEK-C17orf49H0YIS7 233 aa11.41□□□□□ -0.58
CLIP3-205ENST00000592017 HOXA3O43365 443 aaPredicted RBP11.41□□□□□ -0.58
CLIP3-205ENST00000592017 ZNF44P15621 663 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms