RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 TMEM104Q8NE00 496 aa13.91□□□□□ -0.18
GCDH-213ENST00000590627 OR5H6Q8NGV6 325 aa13.91□□□□□ -0.18
GCDH-213ENST00000590627 MCFD2Q8NI22 146 aa13.91□□□□□ -0.18
GCDH-213ENST00000590627 BEX2Q9BXY8 128 aa13.91□□□□□ -0.18
GCDH-213ENST00000590627 ELL3Q9HB65 397 aaPredicted RBP13.91□□□□□ -0.18
GCDH-213ENST00000590627 TMEM106BQ9NUM4 274 aa13.91□□□□□ -0.18
GCDH-213ENST00000590627 NPTNQ9Y639 398 aa13.91□□□□□ -0.18
GCDH-213ENST00000590627 TMEM178BH3BS89 294 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.9□□□□□ -0.18
GCDH-213ENST00000590627 AKR7A2O43488 359 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 CDC14BO60729 498 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 HTR3BO95264 441 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 FSTL3O95633 263 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 CSTBP04080 98 aaKnown RBP13.9□□□□□ -0.18
GCDH-213ENST00000590627 GTF2F2P13984 249 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 IRF2P14316 349 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 DAOP14920 347 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 USF1P22415 310 aaPredicted RBP13.9□□□□□ -0.18
GCDH-213ENST00000590627 HFEQ30201 348 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 OR10K2Q6IF99 312 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 FAM58AQ8N1B3 248 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 OR51T1Q8NGJ9 327 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 OR10K1Q8NGX5 313 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 YIPF5Q969M3 257 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 ZNF488Q96MN9 340 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 KCNK15Q9H427 330 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 HMG20AQ9NP66 347 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 RBFOX1Q9NWB1 397 aaKnown RBP13.9□□□□□ -0.18
GCDH-213ENST00000590627 COMMD3Q9UBI1 195 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 CACNG2Q9Y698 323 aa13.9□□□□□ -0.18
GCDH-213ENST00000590627 SVEP1Q4LDE5 3571 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 A0A1W2PP11 408 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 NDUFS8O00217 210 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 CRTAPO75718 401 aaPredicted RBP13.89□□□□□ -0.19
GCDH-213ENST00000590627 CLPXO76031 633 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 NXPH2O95156 264 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 CYB5R3P00387 301 aaPredicted RBP13.89□□□□□ -0.19
GCDH-213ENST00000590627 IGHV4-31P0DP07 118 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 MGMTP16455 207 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 EGR1P18146 543 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 SERPINA2P20848 420 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 GLRA1P23415 457 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 COL8A2P25067 703 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 GZMKP49863 264 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 RPS27AP62979 156 aaKnown RBP13.89□□□□□ -0.19
GCDH-213ENST00000590627 FAM189A2Q15884 450 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 ACP7Q6ZNF0 438 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 OSR2Q8N2R0 312 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 CCL17Q92583 94 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 SLC25A38Q96DW6 304 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 TM2D1Q9BX74 207 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 TMEM59Q9BXS4 323 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 ABCG5Q9H222 651 aa13.89□□□□□ -0.19
GCDH-213ENST00000590627 SEBOXQ9HB31 216 aaPredicted RBP13.89□□□□□ -0.19
GCDH-213ENST00000590627 MYOZ1Q9NP98 299 aaPredicted RBP13.89□□□□□ -0.19
GCDH-213ENST00000590627 MALRD1Q5VYJ5 2156 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 CTDSP2O14595 271 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 WNT9BO14905 357 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 MPIG6BO95866 241 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 APOA1P02647 267 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 PDLIM4P50479 330 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 EFNB2P52799 333 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 RBM11P57052 281 aaKnown RBP13.88□□□□□ -0.19
GCDH-213ENST00000590627 PLA2G7Q13093 441 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 IL13RA2Q14627 380 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 ZNF146Q15072 292 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 SMIM21Q3B7S5 101 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 UBE2NLQ5JXB2 153 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 TEX36Q5VZQ5 186 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 LINC00299Q6ZSB3 139 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 FAM89BQ8N5H3 189 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 SAMD12Q8N8I0 201 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 EMG1Q92979 244 aaKnown RBP13.88□□□□□ -0.19
GCDH-213ENST00000590627 FAM46BQ96A09 425 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 Q96M66 194 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 URM1Q9BTM9 101 aaKnown RBP13.88□□□□□ -0.19
GCDH-213ENST00000590627 C6orf62Q9GZU0 229 aaPredicted RBP13.88□□□□□ -0.19
GCDH-213ENST00000590627 SHARPINQ9H0F6 387 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 LPAR5Q9H1C0 372 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 WDR13Q9H1Z4 485 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 BANF2Q9H503 90 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 CHODLQ9H9P2 273 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 RHBDL2Q9NX52 303 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 DCAF16Q9NXF7 216 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 TREM2Q9NZC2 230 aa13.88□□□□□ -0.19
GCDH-213ENST00000590627 DYSFO75923 2080 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.87□□□□□ -0.198e-7■■□□□ 12.5
GCDH-213ENST00000590627 FAM90A10PA6NDY2 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A18PA6NE21 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A16PA6NEW6 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A20PA6NIJ5 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A8PA6NJQ4 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A7PA6NKC0 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A22PA8MWA6 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A12PA8MX19 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A5PA8MXJ8 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A23PA8MXZ1 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 VWC2LB2RUY7 222 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 HPGDSO60760 199 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 KNG1P01042 644 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms