RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619	RGP1	Q92546	391 aa	Predicted RBP	4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	UTP4	Q969X6	686 aa	Known RBP	4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	RPE	Q96AT9	228 aa		4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	NDEL1	Q9GZM8	345 aa		4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	RGCC	Q9H4X1	137 aa		4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	VIPAS39	Q9H9C1	493 aa		4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	SCRT2	Q9NQ03	307 aa		4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	NDE1	Q9NXR1	346 aa		4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	GLS2	Q9UI32	602 aa		4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	FBXO7	Q9Y3I1	522 aa		4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	WSB1	Q9Y6I7	421 aa		4.88	□□□□□ -1.63
DNMT1-222	ENST00000590619	LRP1B	Q9NZR2	4599 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619		A0A087X0M5	115 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619		A0A1B0GX30	115 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	DHRS12	A0PJE2	317 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	ZNF878	C9JN71	531 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619		F8VVB4	439 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619		F8VWA3	439 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	ARPC3	O15145	178 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	MPZL2	O60487	215 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	CDK2AP2	O75956	126 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	IGHA1	P01876	353 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	HSPB1	P04792	205 aa	Known RBP	4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	TFAP2A	P05549	437 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	IFNA8	P32881	189 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	HAAO	P46952	286 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	OMP	P47874	163 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	GRB2	P62993	217 aa	Known RBP	4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	TNFRSF9	Q07011	255 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	GALE	Q14376	348 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	TEX30	Q5JUR7	227 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	RRM2B	Q7LG56	351 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	OFCC1	Q8IZS5	231 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	ZNF454	Q8N9F8	522 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	ZNF511	Q8NB15	262 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	OR52L1	Q8NGH7	329 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	OR51L1	Q8NGJ5	315 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	TSPEAR	Q8WU66	669 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	CORO2A	Q92828	525 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	TOMM40L	Q969M1	308 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	KCTD12	Q96CX2	325 aa	Known RBP	4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	PGAM5	Q96HS1	289 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	S1PR3	Q99500	378 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	RASL11B	Q9BPW5	248 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	CHST6	Q9GZX3	395 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	RABEP2	Q9H5N1	569 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	PCDHB16	Q9NRJ7	776 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	ING3	Q9NXR8	418 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	DNAJC27	Q9NZQ0	273 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	ZNF580	Q9UK33	172 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	DSCAML1	Q8TD84	2053 aa		4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	APOB	P04114	4563 aa	Known RBP	4.87	□□□□□ -1.63
DNMT1-222	ENST00000590619	IGHV3-72	A0A0B4J1Y9	119 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	UNC119B	A6NIH7	251 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	OR5B21	A6NL26	309 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	ZNF785	A8K8V0	405 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619		J3QR06	171 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619		J3QT63	122 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	IGHV3-7	P01780	117 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	APOC1	P02654	83 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	LGALS1	P09382	135 aa	Known RBP	4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	CD7	P09564	240 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	OR5H8	P0DN80	308 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	RHCE	P18577	417 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	ATF4	P18848	351 aa	Predicted RBP	4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	PEX2	P28328	305 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	HSD11B1	P28845	292 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	ERP29	P30040	261 aa	Known RBP	4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	MECP2	P51608	486 aa	Known RBP	4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	F2RL1	P55085	397 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	SELENOW	P63302	87 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	ZNF45	Q02386	682 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	KPNB1	Q14974	876 aa	Known RBP	4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	GRK1	Q15835	563 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	SLC35F1	Q5T1Q4	408 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	LYG2	Q86SG7	212 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	TRAPPC6B	Q86SZ2	158 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	ANGPTL5	Q86XS5	388 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	WFDC3	Q8IUB2	231 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	ZNF645	Q8N7E2	425 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	EIF1AD	Q8N9N8	165 aa	Known RBP	4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	OR9G1	Q8NH87	305 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	FLYWCH2	Q96CP2	140 aa	Known RBP	4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	RNF183	Q96D59	192 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	RSRC1	Q96IZ7	334 aa	Known RBP	4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	TPD52L3	Q96J77	140 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	CGREF1	Q99674	301 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	NEURL2	Q9BR09	285 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	TAS2R3	Q9NYW6	316 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	LGALS13	Q9UHV8	139 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	SLC7A11	Q9UPY5	501 aa		4.86	□□□□□ -1.63
DNMT1-222	ENST00000590619	SNN	O75324	88 aa	Predicted RBP	4.85	□□□□□ -1.63
DNMT1-222	ENST00000590619	TPPP	O94811	219 aa		4.85	□□□□□ -1.63
DNMT1-222	ENST00000590619	GABRR1	P24046	479 aa		4.85	□□□□□ -1.63
DNMT1-222	ENST00000590619	MPZ	P25189	248 aa		4.85	□□□□□ -1.63
DNMT1-222	ENST00000590619	KDELR2	P33947	212 aa		4.85	□□□□□ -1.63
DNMT1-222	ENST00000590619	SOX6	P35712	828 aa		4.85	□□□□□ -1.63
DNMT1-222	ENST00000590619	MAP2K3	P46734	347 aa		4.85	□□□□□ -1.63
DNMT1-222	ENST00000590619	GLIPR1	P48060	266 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms