RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CDK5R1Q15078 307 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 SLC9A3R2Q15599 337 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 DEFB112Q30KQ8 113 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 CCDC58Q4VC31 144 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 OR2G6Q5TZ20 316 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 ASPHD2Q6ICH7 369 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 RBMS3Q6XE24 437 aaKnown RBP9.19□□□□□ -0.94
SMAD4-211ENST00000590499 C1orf122Q6ZSJ8 110 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 RNF144BQ7Z419 303 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 PARP16Q8N5Y8 322 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 ZNF485Q8NCK3 441 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 OR13C3Q8NGS6 347 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 OR5AK2Q8NH90 309 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 GATAD2BQ8WXI9 593 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 H1FXQ92522 213 aaKnown RBP9.19□□□□□ -0.94
SMAD4-211ENST00000590499 TFAP2CQ92754 450 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 TNFRSF14Q92956 283 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 LHX4Q969G2 390 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 SLAMF9Q96A28 289 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 OPALINQ96PE5 141 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 ZMAT3Q9HA38 289 aaKnown RBP9.19□□□□□ -0.94
SMAD4-211ENST00000590499 ONECUT1Q9UBC0 465 aa9.19□□□□□ -0.94
SMAD4-211ENST00000590499 CAB39Q9Y376 341 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-211ENST00000590499 SIRT4Q9Y6E7 314 aaPredicted RBP9.19□□□□□ -0.94
SMAD4-211ENST00000590499 TRBV2A0A0J9YWF9 115 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 TMEM89A2RUT3 159 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 RNASEK-C17orf49H0YIS7 233 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 M0R1W7 72 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 SLC1A7O00341 560 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 LALBAP00709 142 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 PIPP12273 146 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-211ENST00000590499 ATP1B3P54709 279 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 DLX1P56177 255 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 SLC34A1Q06495 639 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 PDZK1IP1Q13113 114 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 BAMBIQ13145 260 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 ZNF529Q6P280 563 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 RPL22L1Q6P5R6 122 aaKnown RBP9.18□□□□□ -0.94
SMAD4-211ENST00000590499 LHFPL2Q6ZUX7 228 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 Q8IYB0 196 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 CMTM4Q8IZR5 234 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 C8orf59Q8N0T1 100 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-211ENST00000590499 OR13C9Q8NGT0 318 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 NRG4Q8WWG1 115 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 GGHQ92820 318 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 DUX5Q96PT3 197 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 FAM234AQ9H0X4 552 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 ZCCHC4Q9H5U6 513 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 SEBOXQ9HB31 216 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-211ENST00000590499 SIRT7Q9NRC8 400 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 C19orf12Q9NSK7 152 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 RBFOX1Q9NWB1 397 aaKnown RBP9.18□□□□□ -0.94
SMAD4-211ENST00000590499 IL36RNQ9UBH0 155 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 OR14J1Q9UGF5 321 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 CLEC2DQ9UHP7 191 aa9.18□□□□□ -0.94
SMAD4-211ENST00000590499 EXOSC1Q9Y3B2 195 aaKnown RBP9.18□□□□□ -0.94
SMAD4-211ENST00000590499 TRRAPQ9Y4A5 3859 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 IGKV1-12A0A0C4DH73 117 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 A0A1W2PQ09 198 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 K7N7A8 449 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 OGG1O15527 345 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 XPNPEP2O43895 674 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 IGKV1D-12P01611 117 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 TK1P04183 234 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 MYL12AP19105 171 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 BCL3P20749 454 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 NPBWR2P48146 333 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 POU3F4P49335 361 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 MTCP1P56278 107 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 ZP1P60852 638 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 ACTG1P63261 375 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 COL10A1Q03692 680 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 ST3GAL4Q11206 333 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 HCP5Q6MZN7 132 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 Q6YL49 198 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 TMPRSS11AQ6ZMR5 421 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 MKXQ8IYA7 352 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 MFSD4AQ8N468 514 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 C11orf42Q8N5U0 333 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 OR52N1Q8NH53 320 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 TMEM80Q96HE8 168 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 SPACA5Q96QH8 159 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 COMMD4Q9H0A8 199 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 NOX4Q9NPH5 578 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 PLCXD1Q9NUJ7 323 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 FKBP14Q9NWM8 211 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 CNOT2Q9NZN8 540 aaKnown RBP9.17□□□□□ -0.94
SMAD4-211ENST00000590499 PSORS1C1Q9UIG5 152 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 DHDHQ9UQ10 334 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 KIAA2026Q5HYC2 2103 aa9.17□□□□□ -0.94
SMAD4-211ENST00000590499 A0A0U1RQK1 487 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 TMEM82A0PJX8 343 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 EFCAB10A6NFE3 127 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 HOXA3O43365 443 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-211ENST00000590499 SPRY1O43609 319 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-211ENST00000590499 SULT1B1O43704 296 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 ANGPTL7O43827 346 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 KDM4BO94953 1096 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 INMTO95050 263 aa9.16□□□□□ -0.94
SMAD4-211ENST00000590499 CHRM2P08172 466 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms