RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 FCGR1BQ92637 280 aa17.66■□□□□ 0.42
ATG4D-212ENST00000590096 S100A13Q99584 98 aa17.66■□□□□ 0.42
ATG4D-212ENST00000590096 ELL3Q9HB65 397 aaPredicted RBP17.66■□□□□ 0.42
ATG4D-212ENST00000590096 TCF7L1Q9HCS4 588 aa17.66■□□□□ 0.42
ATG4D-212ENST00000590096 AUP1Q9Y679 476 aa17.66■□□□□ 0.42
ATG4D-212ENST00000590096 RGS9O75916 674 aaPredicted RBP17.65■□□□□ 0.42
ATG4D-212ENST00000590096 LIPFP07098 398 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 SFTPBP07988 381 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 CHRM2P08172 466 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 GABRA5P31644 462 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 BMXP51813 675 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 SNU13P55769 128 aaKnown RBP17.65■□□□□ 0.42
ATG4D-212ENST00000590096 RSU1Q15404 277 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 HSD17B12Q53GQ0 312 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 SPIN3Q5JUX0 258 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 UBE2UQ5VVX9 321 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 JAGN1Q8N5M9 183 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 NKAIN3Q8N8D7 197 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 DACT3Q96B18 629 aaPredicted RBP17.65■□□□□ 0.42
ATG4D-212ENST00000590096 HMG20AQ9NP66 347 aa17.65■□□□□ 0.42
ATG4D-212ENST00000590096 MEGF11A6BM72 1044 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 MAGEA13PA6NCF6 341 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 SC5DO75845 299 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 HAND1O96004 215 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 AVPP01185 164 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 FAM157CP0CG43 387 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 CALCBP10092 127 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 PSMB9P28065 219 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 PTGFRP43088 359 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 OR3A4PP47883 348 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 COL10A1Q03692 680 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 PAX8Q06710 450 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 ASCC1Q8N9N2 400 aaKnown RBP17.64■□□□□ 0.41
ATG4D-212ENST00000590096 NKX3-1Q99801 234 aaPredicted RBP17.64■□□□□ 0.41
ATG4D-212ENST00000590096 DCTN5Q9BTE1 182 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 SLITRK2Q9H156 845 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 IL36RNQ9UBH0 155 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 METRNQ9UJH8 293 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 RPUSD1Q9UJJ7 312 aaKnown RBP17.64■□□□□ 0.41
ATG4D-212ENST00000590096 ING4Q9UNL4 249 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 GSTK1Q9Y2Q3 226 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 SVEP1Q4LDE5 3571 aa17.64■□□□□ 0.41
ATG4D-212ENST00000590096 TNFAIP8O95379 198 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 ADRA2CP18825 462 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 MTNR1BP49286 362 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 ZNF146Q15072 292 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 FAM27D1Q5T7N8 215 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 C1QL2Q7Z5L3 287 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 CDH26Q8IXH8 852 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 NANPQ8TBE9 248 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 PHYHIPQ92561 330 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 FAM234AQ9H0X4 552 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 METTL9Q9H1A3 318 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 OPN4Q9UHM6 478 aa17.63■□□□□ 0.41
ATG4D-212ENST00000590096 SF3B6Q9Y3B4 125 aaKnown RBP17.63■□□□□ 0.41
ATG4D-212ENST00000590096 SH2D1BO14796 132 aa17.62■□□□□ 0.41
ATG4D-212ENST00000590096 ARL6IP5O75915 188 aa17.62■□□□□ 0.41
ATG4D-212ENST00000590096 UCHL1P09936 223 aa17.62■□□□□ 0.41
ATG4D-212ENST00000590096 PPIAL4GP0DN37 164 aa17.62■□□□□ 0.41
ATG4D-212ENST00000590096 DUSP1P28562 367 aa17.62■□□□□ 0.41
ATG4D-212ENST00000590096 SSX1Q16384 188 aa17.62■□□□□ 0.41
ATG4D-212ENST00000590096 ASCL4Q6XD76 172 aa17.62■□□□□ 0.41
ATG4D-212ENST00000590096 TMEM91Q6ZNR0 172 aa17.62■□□□□ 0.41
ATG4D-212ENST00000590096 C1orf229Q6ZS94 237 aaPredicted RBP17.62■□□□□ 0.41
ATG4D-212ENST00000590096 SEBOXQ9HB31 216 aaPredicted RBP17.62■□□□□ 0.41
ATG4D-212ENST00000590096 EXOSC4Q9NPD3 245 aaKnown RBP17.62■□□□□ 0.41
ATG4D-212ENST00000590096 NDUFB11Q9NX14 153 aa17.62■□□□□ 0.41
ATG4D-212ENST00000590096 CCRL2O00421 344 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 CDRT1O95170 752 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 HTR3BO95264 441 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 CSTBP04080 98 aaKnown RBP17.61■□□□□ 0.41
ATG4D-212ENST00000590096 TK1P04183 234 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 SRMP19623 302 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 FGF12P61328 243 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 FABP5Q01469 135 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 SCGB2A2Q13296 93 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 ELP2Q6IA86 826 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 OR10K1Q8NGX5 313 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 MUL1Q969V5 352 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 DMRTB1Q96MA1 342 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 CNTD2Q9H8S5 307 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 PCDHB16Q9NRJ7 776 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 IL36GQ9NZH8 169 aa17.61■□□□□ 0.41
ATG4D-212ENST00000590096 TRBV23-1A0A0A0MS06 115 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 A0A1W2PQ09 198 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 K7N7A8 449 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 ZNF780AO75290 641 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-212ENST00000590096 GABRR1P24046 479 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 GP2P55259 537 aaKnown RBP17.6■□□□□ 0.41
ATG4D-212ENST00000590096 METTL11BQ5VVY1 283 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 GLT8D1Q68CQ7 371 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 AWAT2Q6E213 333 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 CMTM4Q8IZR5 234 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 LY6G5BQ8NDX9 201 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 OR5D13Q8NGL4 314 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 C8orf46Q8TAG6 207 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 PPP1R35Q8TAP8 253 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 FOXRED1Q96CU9 486 aaPredicted RBP17.6■□□□□ 0.41
ATG4D-212ENST00000590096 SNX22Q96L94 193 aa17.6■□□□□ 0.41
ATG4D-212ENST00000590096 UQCC2Q9BRT2 126 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms