RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 FOXRED1Q96CU9 486 aaPredicted RBP8.67□□□□□ -1.02
CLPTM1-211ENST00000589347 SNX22Q96L94 193 aa8.67□□□□□ -1.02
CLPTM1-211ENST00000589347 SLC29A1Q99808 456 aa8.67□□□□□ -1.02
CLPTM1-211ENST00000589347 VCXQ9H320 206 aa8.67□□□□□ -1.02
CLPTM1-211ENST00000589347 ZCCHC4Q9H5U6 513 aa8.67□□□□□ -1.02
CLPTM1-211ENST00000589347 SEBOXQ9HB31 216 aaPredicted RBP8.67□□□□□ -1.02
CLPTM1-211ENST00000589347 EXOSC4Q9NPD3 245 aaKnown RBP8.67□□□□□ -1.02
CLPTM1-211ENST00000589347 ERVK13-1Q9NX77 482 aa8.67□□□□□ -1.02
CLPTM1-211ENST00000589347 hADV38S2A0JD32 116 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 FUOMA2VDF0 154 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 OR4C45A6NMZ5 311 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 MAGEB3O15480 346 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 SULT1B1O43704 296 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 INMTO95050 263 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 MT-ND2P03891 347 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 CD2P06729 351 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 PIPP12273 146 aaPredicted RBP8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 BCL3P20749 454 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 OMGP23515 440 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 GABRR1P24046 479 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 BMXP51813 675 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 EDDM3AQ14507 147 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 ZNF273Q14593 569 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 RCN1Q15293 331 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 GRK1Q15835 563 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 ZNF691Q5VV52 312 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 OLFML2AQ68BL7 652 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 TMEM200BQ69YZ2 307 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 TREML4Q6UXN2 200 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 SERPINA12Q8IW75 414 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 FAM58AQ8N1B3 248 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 BEND2Q8NDZ0 799 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 OR5D14Q8NGL3 314 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 OR13D1Q8NGV5 346 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 TNFRSF14Q92956 283 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 ZNF714Q96N38 554 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 JAM3Q9BX67 310 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 AMBNQ9NP70 447 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 RAB18Q9NP72 206 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 MRPS18AQ9NVS2 196 aaKnown RBP8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 RBFOX1Q9NWB1 397 aaKnown RBP8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 CHCHD3Q9NX63 227 aaKnown RBP8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 MTCH1Q9NZJ7 389 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 C1RLQ9NZP8 487 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 MYRFQ9Y2G1 1151 aa8.66□□□□□ -1.02
CLPTM1-211ENST00000589347 RYR3Q15413 4870 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 CLPSL1A2RUU4 121 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 ZNF728P0DKX0 622 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 CCL3L1P16619 93 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 RAB3AP20336 220 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 COX7A1P24310 79 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 DCKP27707 260 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 SNU13P55769 128 aaKnown RBP8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 DLX1P56177 255 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 PRB3Q04118 309 aaPredicted RBP8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 MEF2CQ06413 473 aaPredicted RBP8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 PDZK1IP1Q13113 114 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 IL18R1Q13478 541 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 ZNF146Q15072 292 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 AANATQ16613 207 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 LRRC75BQ2VPJ9 315 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 CCDC58Q4VC31 144 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 BRICD5Q6PL45 260 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 LIAT1Q6ZQX7 453 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 TRAPPC6BQ86SZ2 158 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 SAXO1Q8IYX7 474 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 DTX3Q8N9I9 347 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 OR51A4Q8NGJ6 313 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 APH1BQ8WW43 257 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 RNF166Q96A37 237 aaPredicted RBP8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 RFT1Q96AA3 541 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 ISG20L2Q9H9L3 353 aaKnown RBP8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 FGF20Q9NP95 211 aaPredicted RBP8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 AASSQ9UDR5 926 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 EXOSC1Q9Y3B2 195 aaKnown RBP8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 TBL2Q9Y4P3 447 aaKnown RBP8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 LINC00312Q9Y6C7 94 aa8.65□□□□□ -1.02
CLPTM1-211ENST00000589347 IGKV1-9A0A0C4DH69 117 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 H3BUX3 64 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 SH2D1BO14796 132 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 MGST3O14880 152 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 TIMM23O14925 209 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 ZNF737O75373 536 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 CLPXO76031 633 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 KDM4BO94953 1096 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 ALX3O95076 343 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 ZFPL1O95159 310 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 TGFBR2P37173 567 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 PPP3R1P63098 170 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 TAF9Q16594 264 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 LRRC36Q1X8D7 754 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 RPL22L1Q6P5R6 122 aaKnown RBP8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 ZNF782Q6ZMW2 699 aaPredicted RBP8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 PNKDQ8N490 385 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 DHRSXQ8N5I4 330 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 PARP16Q8N5Y8 322 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 CHST4Q8NCG5 386 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 OR5D18Q8NGL1 313 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 OR10AC1Q8NH08 325 aa8.64□□□□□ -1.03
CLPTM1-211ENST00000589347 CNIH3Q8TBE1 160 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms