RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	NRIP2	Q9BQI9	281 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	IGKV1-9	A0A0C4DH69	117 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	LDLRAD4	O15165	306 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF44	P15621	663 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	CD81	P60033	236 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	FABP9	Q0Z7S8	132 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	HIKESHI	Q53FT3	197 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR2B11	Q5JQS5	317 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	ANKRD16	Q6P6B7	361 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	VWA1	Q6PCB0	445 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	COLCA1	Q6ZS62	124 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	ANGPTL5	Q86XS5	388 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF584	Q8IVC4	421 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	JAGN1	Q8N5M9	183 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	SSC4D	Q8WTU2	575 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	MALSU1	Q96EH3	234 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	PFDN5	Q99471	154 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	ADAT1	Q9BUB4	502 aa	Known RBP	13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	C1QTNF5	Q9BXJ0	243 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	PIEZO1	Q92508	2521 aa		13.32	□□□□□ -0.28
DDX39A-209	ENST00000589318	LOC100289279	A0A1B0GTE1	492 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	METTL21EP	A6NDL7	271 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	DBX1	A6NMT0	343 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	LCAT	P04180	440 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	COX5B	P10606	129 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	EDN3	P14138	238 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	IGHV1-2	P23083	117 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	ACKR3	P25106	362 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	TMPRSS3	P57727	454 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	TAS2R19	P59542	299 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	RAB4B	P61018	213 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	FOXF2	Q12947	444 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	LBH	Q53QV2	105 aa	Predicted RBP	13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	RTL6	Q6ICC9	239 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	PIK3IP1	Q96FE7	263 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	CNTD2	Q9H8S5	307 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	DSP	P15924	2871 aa	Known RBP	13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	MBD3L3	A6NE82	208 aa	Predicted RBP	13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	AP4M1	O00189	453 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	CD74	P04233	296 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	GTF2F2	P13984	249 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	FAH	P16930	419 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	CD34	P28906	385 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	CAV2	P51636	162 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	RAB1A	P62820	205 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	EIF5A	P63241	154 aa	Known RBP	13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	AWAT2	Q6E213	333 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	CRIP3	Q6Q6R5	217 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	BAP18	Q8IXM2	172 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR5AP2	Q8NGF4	316 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR51S1	Q8NGJ8	323 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	REEP6	Q96HR9	211 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	POFUT1	Q9H488	388 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	FAM215A	Q9Y5M1	114 aa		13.31	□□□□□ -0.28
DDX39A-209	ENST00000589318	MFNG	O00587	321 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	TNFSF13	O75888	250 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF14	P17017	642 aa	Predicted RBP	13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	THBS4	P35443	961 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	ARR3	P36575	388 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR2A2	Q6IF42	318 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	EIF5AL1	Q6IS14	154 aa	Known RBP	13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	STEAP1B	Q6NZ63	245 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318		Q6ZT83	130 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	CNEP1R1	Q8N9A8	125 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	TMEM229B	Q8NBD8	167 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	CCDC54	Q8NEL0	328 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	HIST1H2BA	Q96A08	127 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	SPACA5	Q96QH8	159 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	OCSTAMP	Q9BR26	566 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	PIGL	Q9Y2B2	252 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	KPTN	Q9Y664	436 aa		13.3	□□□□□ -0.28
DDX39A-209	ENST00000589318	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	DHRS7C	A6NNS2	312 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	CTAG2	O75638	210 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	CNOT4	O95628	575 aa	Known RBP	13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	GPX4	P36969	197 aa	Predicted RBP	13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	TDGF1P3	P51864	188 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	UBE2M	P61081	183 aa	Known RBP	13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF92	Q03936	586 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	UBE2V2	Q15819	145 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	KRTCAP3	Q53RY4	240 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	FAM180A	Q6UWF9	173 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR4A4P	Q8NGN8	299 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	RNASE11	Q8TAA1	199 aa	Known RBP	13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	NUDCD2	Q8WVJ2	157 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	C10orf35	Q96D05	121 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	POM121L2	Q96KW2	1035 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	CHST5	Q9GZS9	411 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	hCG_38984	A0A1B0GV85	526 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	CLN5	O75503	358 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	CGA	P01215	116 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	IFNA10	P01566	189 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	ERCC1	P07992	297 aa	Predicted RBP	13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	CCL2	P13500	99 aa		13.29	□□□□□ -0.28
DDX39A-209	ENST00000589318	COX5A	P20674	150 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms