RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 TMEM50BP56557 158 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 PITPNAQ00169 270 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 ZNF79Q15937 498 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 HFEQ30201 348 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 SMIM21Q3B7S5 101 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 CDNFQ49AH0 187 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 RNASE12Q5GAN4 147 aaKnown RBP12.2□□□□□ -0.46
NPC1-207ENST00000588867 PYHIN1Q6K0P9 492 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 BRICD5Q6PL45 260 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 BAIAP2L2Q6UXY1 529 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 RTN4RL2Q86UN3 420 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 ARHGAP5-AS1Q96IT6 56 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 NEDD4LQ96PU5 975 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 TMEM106BQ9NUM4 274 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 PLEKHJ1Q9NW61 149 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 RASL12Q9NYN1 266 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 COL8A2P25067 703 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 CD80P33681 288 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 NR4A2P43354 598 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 PPP5CP53041 499 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 NHLRC3Q5JS37 347 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 PLAC9Q5JTB6 97 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 SIGIRRQ6IA17 410 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 NEU4Q8WWR8 484 aaPredicted RBP12.2□□□□□ -0.46
NPC1-207ENST00000588867 GCDHQ92947 438 aaPredicted RBP12.2□□□□□ -0.46
NPC1-207ENST00000588867 CCL19Q99731 98 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 NPTNQ9Y639 398 aa12.2□□□□□ -0.46
NPC1-207ENST00000588867 DCHS2Q6V1P9 2916 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 H7C417 338 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 DEGS1O15121 323 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 ZNF44P15621 663 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 PTBP1P26599 531 aaKnown RBP eCLIP12.19□□□□□ -0.46
NPC1-207ENST00000588867 C6orf201Q7Z4U5 140 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 C1orf87Q8N0U7 546 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 DEFB108BQ8NET1 73 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 C14orf79Q96F83 325 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 CYYR1Q96J86 154 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 SRRQ9GZT4 340 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 LIME1Q9H400 295 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 GLS2Q9UI32 602 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 ELF5Q9UKW6 265 aaPredicted RBP12.19□□□□□ -0.46
NPC1-207ENST00000588867 AKAP6Q13023 2319 aa12.19□□□□□ -0.46
NPC1-207ENST00000588867 TMEM235A6NFC5 223 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 RFPL4AA6NLU0 287 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 RFPL4AL1F8VTS6 287 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 TMEM178BH3BS89 294 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.18□□□□□ -0.46
NPC1-207ENST00000588867 SH2D1BO14796 132 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 TFF1P04155 84 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 CEBPDP49716 269 aaPredicted RBP12.18□□□□□ -0.46
NPC1-207ENST00000588867 IL13RA2Q14627 380 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 ZNF181Q2M3W8 571 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 MPV17LQ2QL34 196 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 ZNF260Q3ZCT1 412 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 SPIN3Q5JUX0 258 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 HIST2H2BCQ6DN03 193 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 OR8H2Q8N162 312 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 Q8N402 240 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 MARVELD3Q96A59 401 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 PECRQ9BY49 303 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 AUNIPQ9H7T9 357 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 NLKQ9UBE8 527 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 RABL2AQ9UBK7 228 aaPredicted RBP12.18□□□□□ -0.46
NPC1-207ENST00000588867 RABL2BQ9UNT1 228 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A10PA6NDY2 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A18PA6NE21 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A16PA6NEW6 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A20PA6NIJ5 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A8PA6NJQ4 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A7PA6NKC0 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 OR2AT4A6NND4 320 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FOXI3A8MTJ6 420 aaPredicted RBP12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A22PA8MWA6 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A12PA8MX19 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A5PA8MXJ8 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A23PA8MXZ1 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 SIRPB1O00241 398 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 HSPB6O14558 160 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 NDUFS7O75251 213 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 HAND1O96004 215 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A15PP0C7V4 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A13PP0C7W8 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A14PP0C7W9 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAM90A24PP0C7X0 464 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 DAOP14920 347 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 HIST1H1DP16402 221 aaKnown RBP12.18□□□□□ -0.46
NPC1-207ENST00000588867 FUT3P21217 361 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 CD40LGP29965 261 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 ZNF146Q15072 292 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 MICBQ29980 383 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 OLFML2AQ68BL7 652 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 LINC00596Q86U02 117 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 C15orf40Q8WUR7 153 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 NRGNQ92686 78 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 YIPF5Q969M3 257 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 POM121Q96HA1 1249 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 NUDT16L1Q9BRJ7 211 aaKnown RBP12.18□□□□□ -0.46
NPC1-207ENST00000588867 FAAP24Q9BTP7 215 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 WIPI2Q9Y4P8 454 aa12.18□□□□□ -0.46
NPC1-207ENST00000588867 USF3Q68DE3 2245 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms