RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 LINC00854A0A1B0GVQ3 168 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 SULT1C2O00338 296 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 OR7C1O76099 320 aaPredicted RBP18.81■□□□□ 0.6
ATG4D-209ENST00000588857 LPLP06858 475 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 CD55P08174 381 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 MELTFP08582 738 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 GATA4P43694 442 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 GMFBP60983 142 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 SNRPD2P62316 118 aaKnown RBP18.81■□□□□ 0.6
ATG4D-209ENST00000588857 GUCA2AQ02747 115 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 SEH1LQ96EE3 360 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 PECRQ9BY49 303 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 EGLN1Q9GZT9 426 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 DECR2Q9NUI1 292 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 UNC79Q9P2D8 2635 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 H3BUI4 141 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 MFNGO00587 321 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 ORC5O43913 435 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 RBBP9O75884 186 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 TNFRSF1AP19438 455 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 GDNFP39905 211 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 PNLIPRP3Q17RR3 467 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 MPV17LQ2QL34 196 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 SPRNQ5BIV9 151 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 FAM209AQ5JX71 171 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 DNM1P46Q6ZS02 220 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 TOMM5Q8N4H5 51 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 POC5Q8NA72 575 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 OR10Z1Q8NGY1 313 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 SETD6Q8TBK2 473 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 LRRC29Q8WV35 223 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 ERGIC1Q969X5 290 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.81■□□□□ 0.6
ATG4D-209ENST00000588857 FAIMQ9NVQ4 179 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 IL36RNQ9UBH0 155 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 ELF5Q9UKW6 265 aaPredicted RBP18.81■□□□□ 0.6
ATG4D-209ENST00000588857 HSF4Q9ULV5 492 aa18.81■□□□□ 0.6
ATG4D-209ENST00000588857 HRNRQ86YZ3 2850 aaPredicted RBP18.8■□□□□ 0.6
ATG4D-209ENST00000588857 DYSFO75923 2080 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 A6NNC1 897 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 SERPINE3A8MV23 424 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 FUT3P21217 361 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 GNG2P59768 71 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 CCL8P80075 99 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 IKZF1Q13422 519 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 IL13RA2Q14627 380 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 TESK1Q15569 626 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 SWI5Q1ZZU3 235 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 PCGF3Q3KNV8 242 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 ATAD3CQ5T2N8 411 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 SIGIRRQ6IA17 410 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 C6orf201Q7Z4U5 140 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 RTN4RL2Q86UN3 420 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 ZCCHC24Q8N2G6 241 aaKnown RBP18.8■□□□□ 0.6
ATG4D-209ENST00000588857 GPX8Q8TED1 209 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 KLK11Q9UBX7 282 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 KCNK7Q9Y2U2 307 aa18.8■□□□□ 0.6
ATG4D-209ENST00000588857 RBMX2Q9Y388 322 aaKnown RBP18.8■□□□□ 0.6
ATG4D-209ENST00000588857 LRBAP50851 2863 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 H7C417 338 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 PDCD6O75340 191 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 GSTT2BP0CG30 244 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 GLRA1P23415 457 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 CHATP28329 748 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 DUSP1P28562 367 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 CFHR2P36980 270 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 ARFRP1Q13795 201 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 PDCD1Q15116 288 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 HES4Q9HCC6 221 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 GCM1Q9NP62 436 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 ZNF581Q9P0T4 197 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 MTFP1Q9UDX5 166 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 TBC1D24Q9ULP9 559 aa18.79■□□□□ 0.6
ATG4D-209ENST00000588857 MEIS3P1A6NDR6 274 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 VGLL3A8MV65 326 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 C3orf80F5H4A9 247 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 HS3ST1O14792 307 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 ECDO95905 644 aaPredicted RBP18.78■□□□□ 0.6
ATG4D-209ENST00000588857 ACTBP60709 375 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 ACTG1P63261 375 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 ASAH1Q13510 395 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 SMIM21Q3B7S5 101 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 SPIN3Q5JUX0 258 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 OLFML2AQ68BL7 652 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 TRAPPC6BQ86SZ2 158 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 OR11L1Q8NGX0 322 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 NUDCD2Q8WVJ2 157 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 ST8SIA4Q92187 359 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 COX4I2Q96KJ9 171 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 SAP30LQ9HAJ7 183 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 SPACA1Q9HBV2 294 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 RASL12Q9NYN1 266 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 PPP1R3CQ9UQK1 317 aa18.78■□□□□ 0.6
ATG4D-209ENST00000588857 WNT9BO14905 357 aa18.77■□□□□ 0.6
ATG4D-209ENST00000588857 GOSR1O95249 250 aa18.77■□□□□ 0.6
ATG4D-209ENST00000588857 AP3S2P59780 193 aa18.77■□□□□ 0.6
ATG4D-209ENST00000588857 SSBP1Q04837 148 aaKnown RBP18.77■□□□□ 0.6
ATG4D-209ENST00000588857 AGAP6Q5VW22 663 aa18.77■□□□□ 0.6
ATG4D-209ENST00000588857 FAAP24Q9BTP7 215 aa18.77■□□□□ 0.6
ATG4D-209ENST00000588857 WDR13Q9H1Z4 485 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms