RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 LPAR3Q9UBY5 353 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 NPTNQ9Y639 398 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 A0A1W2PQM1 296 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 DHRS7CA6NNS2 312 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 S100A8P05109 93 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 CNN3Q15417 329 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 WDFY1Q8IWB7 410 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 OR13G1Q8NGZ3 307 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF251Q9BRH9 671 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 SPG11Q96JI7 2443 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 IFNA5P01569 189 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 HOXC12P31275 282 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 ACER2Q5QJU3 275 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 C5orf46Q6UWT4 87 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 CPNE4Q96A23 557 aaPredicted RBP12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 TCEAL7Q9BRU2 100 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 TRAPPC2LQ9UL33 140 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 KPTNQ9Y664 436 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 WDFY4Q6ZS81 3184 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 A0A0J9YW62 118 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 A0A1W2PPE3 182 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 SFT2D2O95562 160 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 EIF1P41567 113 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 CYB561P49447 251 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 EDDM3AQ14507 147 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 DHRS11Q6UWP2 260 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 CMTM3Q96MX0 182 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 KCNK17Q96T54 332 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 DUSP23Q9BVJ7 150 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 PECRQ9BY49 303 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 GNG13Q9P2W3 67 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 IGHV5-10-1A0A0J9YXX1 117 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 TSTD3H0UI37 97 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 ST8SIA3O43173 380 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 ZBTB25P24278 435 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 EIF2S3P41091 472 aaKnown RBP12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 UBE2V2Q15819 145 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 ISXQ2M1V0 245 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 ALKBH6Q3KRA9 238 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 CMTM1Q8IZ96 169 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 OR56B2PQ8NGI1 322 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 RFESDQ8TAC1 157 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 C5orf66Q9H5L9 145 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 NECAP2Q9NVZ3 263 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 CLDN16Q9Y5I7 305 aa12.05□□□□□ -0.48
CACNA1A-209ENST00000587525 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 EFNA2O43921 213 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 PLPPR5Q32ZL2 321 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 EMG1Q92979 244 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 PRRX2Q99811 253 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 AK3Q9UIJ7 227 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 NKX2-1P43699 371 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 GSK3AP49840 483 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 RPL23AP62750 156 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 MPPED2Q15777 294 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF468Q5VIY5 522 aaPredicted RBP12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 NAT6Q93015 286 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 GAR1Q9NY12 217 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 HSF4Q9ULV5 492 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 RFNGQ9Y644 331 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 A0A1B0GV90 55 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 GSTP1P09211 210 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 FBP1P09467 338 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 ECH1Q13011 328 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF239Q16600 458 aaKnown RBP12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 RNF212Q495C1 297 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 SPANXN5Q5MJ07 72 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 RABEPKQ7Z6M1 372 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 OBP2BQ9NPH6 170 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 CUL9Q8IWT3 2517 aa12.04□□□□□ -0.48
CACNA1A-209ENST00000587525 NCOA6Q14686 2063 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 RUNX1Q01196 453 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF343Q6P1L6 599 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 UQCC3Q6UW78 93 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 TMPRSS7Q7RTY8 843 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 THNSL2Q86YJ6 484 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 FOXB1Q99853 325 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 PLK3Q9H4B4 646 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 FAM206AQ9NX38 181 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 ABI3Q9P2A4 366 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 DUSP13Q9UII6 198 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 PLCE1Q9P212 2302 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF816-ZNF321PA0A0X1KG74 233 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 MSTNO14793 375 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 RAB5AP20339 215 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 FGF8P55075 233 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 TMEM50BP56557 158 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 ROM1Q03395 351 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF574Q6ZN55 896 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 SPEM1Q8N4L4 309 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 OR10D3Q8NH80 312 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 BSCL2Q96G97 398 aaPredicted RBP12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 DNAJB11Q9UBS4 358 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 CD300LBA8K4G0 201 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF732B4DXR9 585 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 EIF1BO60739 113 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 DHRS3O75911 302 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 SELEP16581 610 aa12.03□□□□□ -0.48
CACNA1A-209ENST00000587525 SULT1A1P50225 295 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms