RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 USP42Q9H9J4 1324 aaKnown RBP1.86□□□□□ -2.11
CACNA1A-208ENST00000587451 MAP3K5Q99683 1374 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 SHANK1Q9Y566 2161 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 A0A0B4J2E0 115 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 A0A1B0GX12 115 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ARGFXA6NJG6 315 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 C9J4A7 227 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 SMKR1H3BMG3 65 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 H7C2Y5 167 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 DNASE2O00115 360 aaPredicted RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 LGALS9O00182 355 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 MRPS12O15235 138 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 RAD51CO43502 376 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 SLC16A7O60669 478 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 HPGDSO60760 199 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ASS1P00966 412 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 IFNA14P01570 189 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 CDK1P06493 297 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TACSTD2P09758 323 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 LIMS3P0CW19 117 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 LIMS4P0CW20 117 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ZNF35P13682 527 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 RPS12P25398 132 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ALDH3A1P30838 453 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 GNRHRP30968 328 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TGFBR2P37173 567 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 GALR1P47211 349 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 PSMD7P51665 324 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TAS2R31P59538 309 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ARF6P62330 175 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 SLC25A11Q02978 314 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ST3GAL4Q11206 333 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 SLC9A3R2Q15599 337 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TRAM1Q15629 374 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ALX1Q15699 326 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 GUK1Q16774 197 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ACSM3Q53FZ2 586 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TPTE2P1Q5T6R2 138 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 FAM27D1Q5T7N8 215 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 OGFRL1Q5TC84 451 aaPredicted RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 HACD4Q5VWC8 232 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 LPCAT4Q643R3 524 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 MED27Q6P2C8 311 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 CEMP1Q6PRD7 247 aaPredicted RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ARL9Q6T311 187 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 EPGNQ6UW88 154 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 HORMAD1Q86X24 394 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 CBLN2Q8IUK8 224 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 C10orf67Q8IYJ2 551 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 OR5L1Q8NGL2 311 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 OR1P1Q8NH06 330 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 OR8U1Q8NH10 309 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 OR51E1Q8TCB6 317 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 C22orf15Q8WYQ4 148 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TMEM54Q969K7 222 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TMA16Q96EY4 203 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 CEP19Q96LK0 163 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TMEM56Q96MV1 263 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 PRAP1Q96NZ9 151 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 EBNA1BP2Q99848 306 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TBL1YQ9BQ87 522 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 MRPS26Q9BYN8 205 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 NXF2Q9GZY0 626 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ARL6Q9H0F7 186 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 MFSD1Q9H3U5 465 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 DSN1Q9H410 356 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 DHX35Q9H5Z1 703 aaKnown RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 TMEM27Q9HBJ8 222 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 KCNJ16Q9NPI9 418 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 ACOT13Q9NPJ3 140 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 FBXO8Q9NRD0 319 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 FBXO6Q9NRD1 293 aaPredicted RBP1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 MTCH2Q9Y6C9 303 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 RAB3GAP2Q9H2M9 1393 aa1.85□□□□□ -2.11
CACNA1A-208ENST00000587451 SCN1AP35498 2009 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 A0A0U1RQV1 116 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 TINCRA0A1B0GVN0 87 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 GOLGA6L4A6NEF3 574 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 NCBP2LA6PVI3 153 aaKnown RBP1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 C21orf140B9A014 251 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 CDIPTO14735 213 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 PFDN6O15212 129 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 BIRC5O15392 142 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 SLC31A1O15431 190 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 NUPL2O15504 423 aaKnown RBP1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 ERI3O43414 337 aaKnown RBP1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 CYTH3O43739 400 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 CDC40O60508 579 aaKnown RBP eCLIP1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 DPM1O60762 260 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 GCM2O75603 506 aaPredicted RBP1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 EIF3GO75821 320 aaKnown RBP eCLIP1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 HLA-AP01891 365 aaKnown RBP1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 APOEP02649 317 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 TYMSP04818 313 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 OR8U9P0C7N5 309 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 P0C880 135 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 RAB4AP20338 218 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 ME2P23368 584 aa1.84□□□□□ -2.11
CACNA1A-208ENST00000587451 ARL2P36404 184 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms