RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 ZNF329Q86UD4 541 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 ABHD12Q8N2K0 398 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 OSR2Q8N2R0 312 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 OR4X2Q8NGF9 303 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 CNN2Q99439 309 aaKnown RBP9.42□□□□□ -0.9
BRCA1-225ENST00000586385 MOB1AQ9H8S9 216 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 ZNF286AQ9HBT8 521 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 ADGRL4Q9HBW9 690 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 NDE1Q9NXR1 346 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 TVP23BQ9NYZ1 205 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 GTF2A1LQ9UNN4 478 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 B2RBV5 119 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 ENTPD6O75354 484 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 CD34P28906 385 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 P2RX3P56373 397 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 RPL23AP62750 156 aaKnown RBP9.41□□□□□ -0.9
BRCA1-225ENST00000586385 EFNB1P98172 346 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 IL18R1Q13478 541 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 SNAPC1Q16533 368 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 PIGWQ7Z7B1 504 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 EGFL6Q8IUX8 553 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 SLC35F2Q8IXU6 374 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 CANT1Q8WVQ1 401 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 RNF166Q96A37 237 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-225ENST00000586385 P2RX4Q99571 388 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 MED4Q9NPJ6 270 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 TMEM14AQ9Y6G1 99 aa9.41□□□□□ -0.9
BRCA1-225ENST00000586385 STAB2Q8WWQ8 2551 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 IGKV1-9A0A0C4DH69 117 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 E9PQ18 207 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 H0YHG0 523 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 MGST3O14880 152 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 BCL3P20749 454 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 GABRR1P24046 479 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 CDK2P24941 298 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 PEX2P28328 305 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 ERP29P30040 261 aaKnown RBP9.4□□□□□ -0.9
BRCA1-225ENST00000586385 ZNF146Q15072 292 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 ODF4Q2M2E3 257 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 HLA-DRB5Q30154 266 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 HSP90B2PQ58FF3 399 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 TPTE2P1Q5T6R2 138 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 AADACL4Q5VUY2 407 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 HEPN1Q6WQI6 88 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 ZBTB49Q6ZSB9 765 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 C8orf86Q6ZUL3 223 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 OR2W3Q7Z3T1 314 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 RNF144BQ7Z419 303 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 CATSPERDQ86XM0 798 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 ARHGAP24Q8N264 748 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 CORO2AQ92828 525 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 EMG1Q92979 244 aaKnown RBP9.4□□□□□ -0.9
BRCA1-225ENST00000586385 CCDC124Q96CT7 223 aaKnown RBP9.4□□□□□ -0.9
BRCA1-225ENST00000586385 AKR1E2Q96JD6 320 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 NOL4LQ96MY1 436 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-225ENST00000586385 ZNF649Q9BS31 505 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 CHST5Q9GZS9 411 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-225ENST00000586385 ARL2BPQ9Y2Y0 163 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 UBE2J1Q9Y385 318 aaPredicted RBP9.4□□□□□ -0.9
BRCA1-225ENST00000586385 LSM4Q9Y4Z0 139 aaKnown RBP9.4□□□□□ -0.9
BRCA1-225ENST00000586385 SNX5Q9Y5X3 404 aa9.4□□□□□ -0.9
BRCA1-225ENST00000586385 IGKV1-12A0A0C4DH73 117 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 TRBV2A0A0J9YWF9 115 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 PSMB11A5LHX3 300 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A18PA6NE21 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A16PA6NEW6 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A20PA6NIJ5 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A9PA6NNJ1 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A12PA8MX19 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A5PA8MXJ8 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 BUB1B-PAK6H3BSN5 160 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 SIRPB1O00241 398 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 CLIC3O95833 236 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 IGKV1D-12P01611 117 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 SNRNP70P08621 437 aaKnown RBP9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A15PP0C7V4 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A13PP0C7W8 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A14PP0C7W9 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FAM90A24PP0C7X0 464 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 T-ENOLP0DO92 83 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 ANXA8P13928 327 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 EPHA2P29317 976 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 BRS3P32247 399 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 GLIPR1P48060 266 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 FUT6P51993 359 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 CRISP1P54107 249 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 MEPCEQ7L2J0 689 aaKnown RBP9.39□□□□□ -0.91
BRCA1-225ENST00000586385 STMN2Q93045 179 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 ASB9Q96DX5 294 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 COQ2Q96H96 371 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 DUX3Q96PT4 197 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.39□□□□□ -0.91
BRCA1-225ENST00000586385 SLC7A11Q9UPY5 501 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 U3KQK5 164 aa9.39□□□□□ -0.91
BRCA1-225ENST00000586385 RYR2Q92736 4967 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 TENM2Q9NT68 2774 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 DYNC2H1Q8NCM8 4307 aaKnown RBP9.38□□□□□ -0.91
BRCA1-225ENST00000586385 A0A087X0M5 115 aa9.38□□□□□ -0.91
BRCA1-225ENST00000586385 A0A1B0GX30 115 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms