RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 RPS4Y2Q8TD47 263 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 SDSLQ96GA7 329 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 LYZL4Q96KX0 146 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 MICU1Q9BPX6 476 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 GPR61Q9BZJ8 451 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 YIPF3Q9GZM5 350 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 MRPS18AQ9NVS2 196 aaKnown RBP14.45□□□□□ -0.1
TOP3A-220ENST00000585031 CHCHD3Q9NX63 227 aaKnown RBP14.45□□□□□ -0.1
TOP3A-220ENST00000585031 PTTG2Q9NZH5 202 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 COMMD3-BMI1R4GMX3 469 aa14.45□□□□□ -0.1
TOP3A-220ENST00000585031 ZNF850A8MQ14 1090 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 PRR23D1E9PI22 279 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-220ENST00000585031 PRR23D2P0DMB1 279 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-220ENST00000585031 LMO1P25800 156 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 GNALP38405 381 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.44□□□□□ -0.1
TOP3A-220ENST00000585031 PRDX4Q13162 271 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 TMED1Q13445 227 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 IRF3Q14653 427 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 TIGD6Q17RP2 521 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 AADACL4Q5VUY2 407 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 RNLSQ5VYX0 342 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 CENPVQ7Z7K6 275 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-220ENST00000585031 ZNF511Q8NB15 262 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 RAB2BQ8WUD1 216 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 ISOC1Q96CN7 298 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 TSC22D3Q99576 134 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 ASCL2Q99929 193 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 BCL7BQ9BQE9 202 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 ERGIC3Q9Y282 383 aa14.44□□□□□ -0.1
TOP3A-220ENST00000585031 LSM4Q9Y4Z0 139 aaKnown RBP14.44□□□□□ -0.1
TOP3A-220ENST00000585031 GLCEO94923 617 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 INMTO95050 263 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 ANXA2P07355 339 aaKnown RBP14.43□□□□□ -0.1
TOP3A-220ENST00000585031 MYL12AP19105 171 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 GLRA1P23415 457 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 C21orf33P30042 268 aaPredicted RBP14.43□□□□□ -0.1
TOP3A-220ENST00000585031 HTR1FP30939 366 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 CX3CR1P49238 355 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 GP2P55259 537 aaKnown RBP14.43□□□□□ -0.1
TOP3A-220ENST00000585031 RPL31P62899 125 aaKnown RBP14.43□□□□□ -0.1
TOP3A-220ENST00000585031 TAF13Q15543 124 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 GFOD2Q3B7J2 385 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 DMRTC1Q5HYR2 192 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 FAM57BQ71RH2 274 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 DPF1Q92782 380 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 MALSU1Q96EH3 234 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 RNFT2Q96EX2 444 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 RTL8AQ9BWD3 113 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 FGF20Q9NP95 211 aaPredicted RBP14.43□□□□□ -0.1
TOP3A-220ENST00000585031 ABCB10Q9NRK6 738 aa14.43□□□□□ -0.1
TOP3A-220ENST00000585031 DIMT1Q9UNQ2 313 aaKnown RBP14.43□□□□□ -0.1
TOP3A-220ENST00000585031 EXOSC1Q9Y3B2 195 aaKnown RBP14.43□□□□□ -0.1
TOP3A-220ENST00000585031 MEX3AA1L020 520 aaKnown RBP14.42□□□□□ -0.1
TOP3A-220ENST00000585031 MYL12BO14950 172 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 ARG1P05089 322 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 SPARCP09486 303 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 CEBPDP49716 269 aaPredicted RBP14.42□□□□□ -0.1
TOP3A-220ENST00000585031 CAPZA1P52907 286 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 C18orf65Q6ZTR6 163 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 BCDIN3DQ7Z5W3 292 aaKnown RBP14.42□□□□□ -0.1
TOP3A-220ENST00000585031 CPOQ8IVL8 374 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 PROKR2Q8NFJ6 384 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 OTULINQ96BN8 352 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 RNF170Q96K19 258 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 MND1Q9BWT6 205 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 PITPNC1Q9UKF7 332 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 LRP12Q9Y561 859 aa14.42□□□□□ -0.1
TOP3A-220ENST00000585031 SH2D7A6NKC9 451 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-220ENST00000585031 TMEM210A6NLX4 147 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 FAM90A22PA8MWA6 464 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 ZNF593O00488 134 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-220ENST00000585031 GSTT1P30711 240 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 DYNLT3P51808 116 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 ZNF121P58317 390 aaPredicted RBP14.41□□□□□ -0.1
TOP3A-220ENST00000585031 ZNF626Q68DY1 528 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 PLBD1Q6P4A8 553 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 MEPCEQ7L2J0 689 aaKnown RBP14.41□□□□□ -0.1
TOP3A-220ENST00000585031 ANKRD13BQ86YJ7 626 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 OR52I1Q8NGK6 324 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 OR2T27Q8NH04 317 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 LGALS12Q96DT0 336 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 AMELYQ99218 206 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 BRD7Q9NPI1 651 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 TBL2Q9Y4P3 447 aaKnown RBP14.41□□□□□ -0.1
TOP3A-220ENST00000585031 HILPDAQ9Y5L2 63 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 MPC1Q9Y5U8 109 aa14.41□□□□□ -0.1
TOP3A-220ENST00000585031 PLECQ15149 4684 aaKnown RBP14.4□□□□□ -0.1
TOP3A-220ENST00000585031 RFPL4AA6NLU0 287 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 ANXA2P2A6NMY6 339 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 C17orf98A8MV24 154 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 ZNF878C9JN71 531 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 RFPL4AL1F8VTS6 287 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 F2RL2O00254 374 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 MTRF1O75570 445 aaKnown RBP14.4□□□□□ -0.1
TOP3A-220ENST00000585031 GYPBP06028 91 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 CD24P25063 80 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 ATP6V1E1P36543 226 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 ENTPD1P49961 510 aa14.4□□□□□ -0.1
TOP3A-220ENST00000585031 GPM6AP51674 278 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms