RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	BCL6B	Q8N143	479 aa	Predicted RBP	13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908		Q8N7P7	452 aa		13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908	PXT1	Q8NFP0	134 aa		13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908	OR13C5	Q8NGS8	318 aa		13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908	C22orf15	Q8WYQ4	148 aa		13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908	SGCD	Q92629	289 aa		13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908	RFT1	Q96AA3	541 aa		13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908	ELL3	Q9HB65	397 aa	Predicted RBP	13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908	TAS2R4	Q9NYW5	299 aa		13.37	□□□□□ -0.27
ERBB2-222	ENST00000584908	DNHD1	Q96M86	4753 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	TRBV5-7	A0A0A0MS05	114 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	ANGPTL7	O43827	346 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	CEL	P19835	753 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	SRSF2	Q01130	221 aa	Known RBP	13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	COL10A1	Q03692	680 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	ELP2	Q6IA86	826 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	ASCL4	Q6XD76	172 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	VMO1	Q7Z5L0	202 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908		Q8NFD4	153 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	OR52N4	Q8NGI2	321 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	OR5D18	Q8NGL1	313 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	SPATA3	Q8NHX4	192 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	TBC1D15	Q8TC07	691 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	TNFRSF14	Q92956	283 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	ZNF48	Q96MX3	618 aa	Predicted RBP	13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	TMEM138	Q9NPI0	162 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	C19orf12	Q9NSK7	152 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	ONECUT1	Q9UBC0	465 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	IL36RN	Q9UBH0	155 aa		13.36	□□□□□ -0.27
ERBB2-222	ENST00000584908	TENM1	Q9UKZ4	2725 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	IGHV3OR16-10	A0A075B7F0	116 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908		A0A1W2PQ09	198 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	MAGEB3	O15480	346 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	INMT	O95050	263 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	HAND1	O96004	215 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	PRKACA	P17612	351 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	CAPZA1	P52907	286 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	RPL31	P62899	125 aa	Known RBP	13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	SPHAR	Q15513	63 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	C17orf107	Q6ZR85	190 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	PHC2	Q8IXK0	858 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	OR8H2	Q8N162	312 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	SIGLECL1	Q8N7X8	197 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	ZDHHC22	Q8N966	263 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	OR5D13	Q8NGL4	314 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	THRSP	Q92748	146 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	SNX22	Q96L94	193 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	OR5M11	Q96RB7	305 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	METTL8	Q9H825	291 aa	Known RBP	13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	ESM1	Q9NQ30	184 aa		13.35	□□□□□ -0.27
ERBB2-222	ENST00000584908	IGHV1-69D	A0A0B4J2H0	117 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	TMEM82	A0PJX8	343 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	GABRP	O00591	440 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	RGS10	O43665	173 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	IGHV1-69	P01742	117 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	TMEM225B	P0DP42	221 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	PRTN3	P24158	256 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	LMO1	P25800	156 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	BMX	P51813	675 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	PPP3R1	P63098	170 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	GPR50	Q13585	617 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	RBM48	Q5RL73	367 aa	Known RBP	13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	BRD3OS	Q6XYD6	125 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	PRSS48	Q7RTY5	328 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	C11orf42	Q8N5U0	333 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	ASCC1	Q8N9N2	400 aa	Known RBP	13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	LHX4	Q969G2	390 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	DERL3	Q96Q80	235 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	OR14A2	Q96R54	314 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	C19orf24	Q9BVV8	132 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	GLS2	Q9UI32	602 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	FOXJ3	Q9UPW0	622 aa		13.34	□□□□□ -0.27
ERBB2-222	ENST00000584908	TRAV8-7	A0A075B6U6	113 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	PNMA8C	A0A1B0GUJ8	204 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	SH2D1B	O14796	132 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	PSPN	O60542	156 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	RGS9	O75916	674 aa	Predicted RBP	13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	BDKRB2	P30411	391 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	MTNR1B	P49286	362 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	TMEM200B	Q69YZ2	307 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	UNQ9370/PRO34162	Q6UXP9	181 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	RBMS3	Q6XE24	437 aa	Known RBP	13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	FAM185A	Q8N0U4	392 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	MS4A15	Q8N5U1	240 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	OR51T1	Q8NGJ9	327 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	FAM216A	Q8WUB2	273 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	ORAI1	Q96D31	301 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	CNBD2	Q96M20	576 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	C1orf147	Q96MC9	270 aa	Predicted RBP	13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	ZNF184	Q99676	751 aa	Predicted RBP	13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	ZMAT3	Q9HA38	289 aa	Known RBP	13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	ISYNA1	Q9NPH2	558 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	IL36G	Q9NZH8	169 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	CKLF	Q9UBR5	152 aa		13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	RRP15	Q9Y3B9	282 aa	Known RBP	13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908	SOX21	Q9Y651	276 aa	Predicted RBP	13.33	□□□□□ -0.28
ERBB2-222	ENST00000584908		A0A1W2PPH5	198 aa		13.32	□□□□□ -0.28
ERBB2-222	ENST00000584908	RNASEK-C17orf49	H0YIS7	233 aa		13.32	□□□□□ -0.28
ERBB2-222	ENST00000584908	CLDN34	H7C241	214 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms