RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TMEM155Q4W5P6 130 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 NHLRC3Q5JS37 347 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 Q5PR19 223 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 SHEQ5VZ18 495 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 PRSS57Q6UWY2 283 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 LRRC28Q86X40 367 aaPredicted RBP15.34■□□□□ 0.05
RFFL-211ENST00000584541 SPICQ8N5J4 248 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 OR5T2Q8NGG2 359 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 SEH1LQ96EE3 360 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 POM121Q96HA1 1249 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 FOXC2Q99958 501 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 TMEM165Q9HC07 324 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 COMMD3Q9UBI1 195 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 APCP25054 2843 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 METTL21EPA6NDL7 271 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 RFPL4AA6NLU0 287 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 RFPL4AL1F8VTS6 287 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 H3BUI4 141 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 GYPAP02724 150 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 RPS27AP62979 156 aaKnown RBP15.33■□□□□ 0.04
RFFL-211ENST00000584541 IKZF1Q13422 519 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 MPV17LQ2QL34 196 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 STUMQ69YW2 141 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 DCDC5Q6ZRR9 648 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 MCFD2Q8NI22 146 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 Q96M66 194 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 GAL3ST1Q99999 423 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 BPESC1Q9GZL8 116 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 SLIRPQ9GZT3 109 aaKnown RBP15.33■□□□□ 0.04
RFFL-211ENST00000584541 DNTTIP1Q9H147 329 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 IL36RNQ9UBH0 155 aa15.33■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A10PA6NDY2 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A18PA6NE21 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A16PA6NEW6 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A20PA6NIJ5 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A8PA6NJQ4 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A7PA6NKC0 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A22PA8MWA6 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A12PA8MX19 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A5PA8MXJ8 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A23PA8MXZ1 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 DEGS1O15121 323 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 HAND1O96004 215 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 CHRM2P08172 466 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A15PP0C7V4 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A13PP0C7W8 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A14PP0C7W9 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 FAM90A24PP0C7X0 464 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 ZNF44P15621 663 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 SLC25A16P16260 332 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 GABRR1P24046 479 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 DUSP1P28562 367 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 PRDX2P32119 198 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 ART1P52961 327 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 SCN1BQ07699 218 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 UBE2NLQ5JXB2 153 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 DNM1P46Q6ZS02 220 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 SLC36A1Q7Z2H8 476 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 SAMD12Q8N8I0 201 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 OR5H6Q8NGV6 325 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 ANGPTL6Q8NI99 470 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 PHF21AQ96BD5 680 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 CMTM3Q96MX0 182 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 TMEM246Q9BRR3 403 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 TM2D1Q9BX74 207 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 ATG5Q9H1Y0 275 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 ZNF665Q9H7R5 613 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 SEBOXQ9HB31 216 aaPredicted RBP15.32■□□□□ 0.04
RFFL-211ENST00000584541 RHBDL2Q9NX52 303 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 PCDHB10Q9UN67 800 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 ABCA12Q86UK0 2595 aa15.32■□□□□ 0.04
RFFL-211ENST00000584541 A0A075B6Q4 140 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 IGKV1D-17A0A075B6S4 117 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 GEMIN2O14893 280 aaKnown RBP15.31■□□□□ 0.04
RFFL-211ENST00000584541 RGS5O15539 181 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 SCGNO76038 276 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 OR7C1O76099 320 aaPredicted RBP15.31■□□□□ 0.04
RFFL-211ENST00000584541 NR4A2P43354 598 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 TAF9Q16594 264 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 CNPY1Q3B7I2 92 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 ATPAF1Q5TC12 328 aaPredicted RBP15.31■□□□□ 0.04
RFFL-211ENST00000584541 CHST4Q8NCG5 386 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 OR56B1Q8NGI3 324 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 MED30Q96HR3 178 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 C6orf62Q9GZU0 229 aaPredicted RBP15.31■□□□□ 0.04
RFFL-211ENST00000584541 LPAR5Q9H1C0 372 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 SPACA1Q9HBV2 294 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 MIOXQ9UGB7 285 aa15.31■□□□□ 0.04
RFFL-211ENST00000584541 IGHV4-30-2A0A087WSY4 118 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 VWC2LB2RUY7 222 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 TMPRSS2O15393 492 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 ADAM20O43506 726 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 PITPNBP48739 271 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 CEBPDP49716 269 aaPredicted RBP15.3■□□□□ 0.04
RFFL-211ENST00000584541 EFNB2P52799 333 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 IL13RA1P78552 427 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 ZNF788Q6ZQV5 615 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 NLRC3Q7RTR2 1065 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 ZNF561Q8N587 486 aa15.3■□□□□ 0.04
RFFL-211ENST00000584541 PPP1R35Q8TAP8 253 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms