RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	LAT2	Q9GZY6	243 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SEMA5B	Q9P283	1151 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	KPTN	Q9Y664	436 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	CCDC187	A0A096LP49	1063 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ZNF205	O95201	554 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PMS2P2	O95744	297 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	CELA3A	P09093	270 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	B4GALT1	P15291	398 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	KLK2	P20151	261 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	RAB2A	P61019	212 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	RPL27	P61353	136 aa	Known RBP	10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ISX	Q2M1V0	245 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ZNF440	Q8IYI8	595 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	RNF128	Q8TEB7	428 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TMEM14A	Q9Y6G1	99 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OTOGL	Q3ZCN5	2332 aa		10.17	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PCNX2	A6NKB5	2137 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	NUP210L	Q5VU65	1888 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TRAV36DV7	A0A075B6V5	113 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	IGLV1-36	A0A0B4J1U3	117 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	LNP1	A1A4G5	178 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SDCBP	O00560	298 aa	Predicted RBP	10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	EREG	O14944	169 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	GP1BB	P13224	206 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ABO	P16442	354 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	CDA	P32320	146 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	CASR	P41180	1078 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PNLIPRP2	P54317	469 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	RAB1A	P62820	205 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	C1orf140	Q5VVS0	124 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ZNF101	Q8IZC7	436 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR10R2	Q8NGX6	335 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	GLYATL2	Q8WU03	294 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SEC61A2	Q9H9S3	476 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	RASL12	Q9NYN1	266 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	LPAR3	Q9UBY5	353 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	MUC6	Q6W4X9	2439 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SIAH2	O43255	324 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	EIF4E2	O60573	245 aa	Known RBP	10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	STK17B	O94768	372 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	FARS2	O95363	451 aa	Known RBP	10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	MGMT	P16455	207 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	NFYB	P25208	207 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	RFC3	P40938	356 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	POU3F1	Q03052	451 aa	Predicted RBP	10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	DNM1P46	Q6ZS02	220 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	NAXD	Q8IW45	347 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	BATF2	Q8N1L9	274 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ZNF519	Q8TB69	540 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	DCUN1D4	Q92564	292 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ADAT3	Q96EY9	351 aa	Predicted RBP	10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	CHRNA10	Q9GZZ6	450 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	FN3KRP	Q9HA64	309 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PLEK2	Q9NYT0	353 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR52A1	Q9UKL2	312 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	CSAG2	Q9Y5P2	127 aa		10.16	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TSTD3	H0UI37	97 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SLC33A1	O00400	549 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR2T1	O43869	369 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ACTL6A	O96019	429 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ZNF823	P16415	610 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PPIA	P62937	165 aa	Known RBP	10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	UNC119	Q13432	240 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	HNF4G	Q14541	408 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SLC23A3	Q6PIS1	610 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	BOD1L1	Q8NFC6	3051 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	HRH4	Q9H3N8	390 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	BARX1	Q9HBU1	254 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SMPX	Q9UHP9	88 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TNFSF18	Q9UNG2	199 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	MSGN1	A6NI15	193 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	GLI4	P10075	376 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ADCYAP1	P18509	176 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ADGRE4P	Q86SQ3	457 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PAQR4	Q8N4S7	273 aa	Predicted RBP	10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TMEM156	Q8N614	296 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	HHLA2	Q9UM44	414 aa		10.15	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	CEP250	Q9BV73	2442 aa		10.15	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	RALGAPA1	Q6GYQ0	2036 aa		10.15	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	MED19	A0JLT2	244 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TMEM200C	A6NKL6	621 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063		K7EP13	123 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	PLPP3	O14495	311 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	MPIG6B	O95866	241 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	CHRM2	P08172	466 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	HLA-G	P17693	338 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ARR3	P36575	388 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	ZNF616	Q08AN1	781 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	FAM166A	Q6J272	317 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	KCTD18	Q6PI47	426 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	OR52N5	Q8NH56	324 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	THAP6	Q8TBB0	222 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	C15orf40	Q8WUR7	153 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	FAM230A	A0A1W2PPH8	454 aa		10.14	□□□□□ -0.79
CDK5RAP3-231	ENST00000584063	TUBAL3	A6NHL2	446 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms