RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 NAT6Q93015 286 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 TMEM203Q969S6 136 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 CPB2Q96IY4 423 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 WFIKKN1Q96NZ8 548 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 MGLLQ99685 303 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 CHCHD5Q9BSY4 110 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 RNF126Q9BV68 326 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 HINT2Q9BX68 163 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 SEC11CQ9BY50 192 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 METTL8Q9H825 291 aaKnown RBP3.85□□□□□ -1.79
SS18-223ENST00000583595 EXOSC4Q9NPD3 245 aaKnown RBP3.85□□□□□ -1.79
SS18-223ENST00000583595 NLE1Q9NVX2 485 aaPredicted RBP3.85□□□□□ -1.79
SS18-223ENST00000583595 RASL12Q9NYN1 266 aa3.85□□□□□ -1.79
SS18-223ENST00000583595 DHCR7Q9UBM7 475 aaKnown RBP3.85□□□□□ -1.79
SS18-223ENST00000583595 ZNF629Q9UEG4 869 aaPredicted RBP3.85□□□□□ -1.79
SS18-223ENST00000583595 DDX60LQ5H9U9 1706 aaKnown RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 SIPA1L3O60292 1781 aaPredicted RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 TRBV9A0A0B4J1U6 114 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 A0A1B0GTH9 108 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 FAM231BA6NCW3 169 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 FAM220BPB1ANY3 271 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 G3V3Q6 166 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CHST10O43529 356 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 SSNA1O43805 119 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 EDIL3O43854 480 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 OR2T1O43869 369 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CTNSO60931 367 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 SCN2BO60939 215 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 RDH16O75452 317 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CDRT1O95170 752 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 VENTXO95231 258 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 SIX6O95475 246 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 LSM8O95777 96 aaKnown RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 PTHP01270 115 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 IFNA17P01571 189 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 TCRBP04435 133 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 MELTFP08582 738 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CD3GP09693 182 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 GKN3PP0CG01 181 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 RD3LP0DJH9 198 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CT45A10P0DMU9 189 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 C1GALT1C1LP0DN25 315 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 PIPP12273 146 aaPredicted RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 NQO2P16083 231 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CXCL3P19876 107 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CNR1P21554 472 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 SLC2A5P22732 501 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CD82P27701 267 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 GGT2P36268 569 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CSNK1DP48730 415 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 DAPP51397 102 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 EFNA3P52797 238 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 HCCSP53701 268 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 RPS15AP62244 130 aaKnown RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 RPL36AP83881 106 aaKnown RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 SLC25A11Q02978 314 aaKnown RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 SLC10A7Q0GE19 358 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 TWF1Q12792 350 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 SKP2Q13309 424 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 LY6DQ14210 128 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 TSNQ15631 228 aaKnown RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 GSG1Q2KHT4 349 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 SLC22A6Q4U2R8 563 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 PYY3Q5JQD4 70 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 RNLSQ5VYX0 342 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 LPCAT3Q6P1A2 487 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CNIH2Q6PI25 160 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 ALKAL2Q6UX46 152 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 ALKAL1Q6UXT8 129 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 NDUFAF7Q7L592 441 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 DCXRQ7Z4W1 244 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CMC1Q7Z7K0 106 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CYP4Z1Q86W10 505 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 PRR22Q8IZ63 422 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 ZNF614Q8N883 585 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 OR8J3Q8NGG0 315 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 OR9I1Q8NGQ6 314 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 OR2A12Q8NGT7 310 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 OR10K1Q8NGX5 313 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 OR2G2Q8NGZ5 317 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 OR4K15Q8NH41 348 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 UBA3Q8TBC4 463 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 SLC7A13Q8TCU3 470 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 NEK7Q8TDX7 302 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 APH1BQ8WW43 257 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 ASB13Q8WXK3 278 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 ACOT12Q8WYK0 555 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 TNFRSF14Q92956 283 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 ECHDC3Q96DC8 303 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 PHYHIPLQ96FC7 376 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 PGLYRP4Q96LB8 373 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 OR8B4Q96RC9 309 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 LITAFQ99732 161 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 KLHDC3Q9BQ90 382 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 GABARAPL3Q9BY60 117 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 ACTR3CQ9C0K3 210 aaPredicted RBP3.84□□□□□ -1.79
SS18-223ENST00000583595 DERL2Q9GZP9 239 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 CHST5Q9GZS9 411 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 HDHD2Q9H0R4 259 aa3.84□□□□□ -1.79
SS18-223ENST00000583595 DHX35Q9H5Z1 703 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms