RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 Q8IYB0 196 aa17.25■□□□□ 0.35
CSNK1D-216ENST00000581108 TPRX1Q8N7U7 411 aa17.25■□□□□ 0.35
CSNK1D-216ENST00000581108 SLC29A1Q99808 456 aa17.25■□□□□ 0.35
CSNK1D-216ENST00000581108 CHST6Q9GZX3 395 aa17.25■□□□□ 0.35
CSNK1D-216ENST00000581108 SEBOXQ9HB31 216 aaPredicted RBP17.25■□□□□ 0.35
CSNK1D-216ENST00000581108 HHLA2Q9UM44 414 aa17.25■□□□□ 0.35
CSNK1D-216ENST00000581108 TRBV2A0A0J9YWF9 115 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 OR4C45A6NMZ5 311 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 PSPNO60542 156 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 CYB5AP00167 134 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 ARG1P05089 322 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 IGHV1-8P0DP01 117 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 GABRR1P24046 479 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 RAB13P51153 203 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 SNU13P55769 128 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 ZNF91Q05481 1191 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 MEF2CQ06413 473 aaPredicted RBP17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 LHFPL2Q6ZUX7 228 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 ENTHD1Q8IYW4 607 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 OR13D1Q8NGV5 346 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 RFT1Q96AA3 541 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 ZNF714Q96N38 554 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 MMP27Q9H306 513 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 AMBNQ9NP70 447 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 MYRFQ9Y2G1 1151 aa17.24■□□□□ 0.35
CSNK1D-216ENST00000581108 TET2Q6N021 2002 aaPredicted RBP17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 MEGF11A6BM72 1044 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 CHST1O43916 411 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 RBP4P02753 201 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 DBTP11182 482 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 PRKACAP17612 351 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 PEX2P28328 305 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 KIR2DS4P43632 304 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 PDZK1IP1Q13113 114 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 ALKBH1Q13686 389 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 ZNF146Q15072 292 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 GRK1Q15835 563 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 PLA1AQ53H76 456 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 LDLRAD2Q5SZI1 272 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 OR4S1Q8NGB4 309 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 OR13C3Q8NGS6 347 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 SPSB1Q96BD6 273 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 OPALINQ96PE5 141 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 SPACA5Q96QH8 159 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 C9orf16Q9BUW7 83 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 ALG8Q9BVK2 526 aa17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 ISG20L2Q9H9L3 353 aaKnown RBP17.23■□□□□ 0.35
CSNK1D-216ENST00000581108 IGKV1-12A0A0C4DH73 117 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 hADV38S2A0JD32 116 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 ODF3BA8MYP8 253 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 TSPAN15O95858 294 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 IGKV1D-12P01611 117 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 OCM2P0CE71 109 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 OCMP0CE72 109 aaPredicted RBP17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 ACTA2P62736 377 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 ACTG2P63267 376 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 GALEQ14376 348 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 C10orf67Q8IYJ2 551 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 ZNF676Q8N7Q3 588 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 OR11H6Q8NGC7 330 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 OR4C13Q8NGP0 309 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 OR13C9Q8NGT0 318 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 RHOXF1Q8NHV9 184 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 S100A14Q9HCY8 104 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 HMG20AQ9NP66 347 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 RAB18Q9NP72 206 aa17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 TBL2Q9Y4P3 447 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-216ENST00000581108 VGLL3A8MV65 326 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 EFNB2P52799 333 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 DYNC1I2Q13409 638 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 FAM189A2Q15884 450 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 SSX2Q16385 188 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 SPIN3Q5JUX0 258 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 ZNF626Q68DY1 528 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 MALSU1Q96EH3 234 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 MRPL48Q96GC5 212 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 ZNF649Q9BS31 505 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 GSTK1Q9Y2Q3 226 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 LINC00312Q9Y6C7 94 aa17.21■□□□□ 0.35
CSNK1D-216ENST00000581108 LOC100130705A0A1B0GUX0 176 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 E9PI62 339 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 SIRPB1O00241 398 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 MGST3O14880 152 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 MT-ND2P03891 347 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 OR3A1P47881 315 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 HIST2H2BDQ6DRA6 164 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 CCBE1Q6UXH8 406 aaPredicted RBP17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 ZBTB49Q6ZSB9 765 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 SYS1Q8N2H4 156 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 OR5D18Q8NGL1 313 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 Q96MT0 163 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 ZCCHC4Q9H5U6 513 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 RANBP3Q9H6Z4 567 aaPredicted RBP17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 FAM118AQ9NWS6 357 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 ERVK13-1Q9NX77 482 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 GLS2Q9UI32 602 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 FOXJ3Q9UPW0 622 aa17.2■□□□□ 0.34
CSNK1D-216ENST00000581108 SH2D1BO14796 132 aa17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 MPZL2O60487 215 aa17.19■□□□□ 0.34
CSNK1D-216ENST00000581108 FADS2O95864 444 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms