RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 DGCR14Q96DF8 476 aaKnown RBP8.7□□□□□ -1.02
CCDC47-203ENST00000580986 SDSLQ96GA7 329 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 TM2D1Q9BX74 207 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 WDR13Q9H1Z4 485 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 DCSTAMPQ9H295 470 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 LIN7BQ9HAP6 207 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 RBFOX1Q9NWB1 397 aaKnown RBP8.7□□□□□ -1.02
CCDC47-203ENST00000580986 CCDC59Q9P031 241 aaKnown RBP8.7□□□□□ -1.02
CCDC47-203ENST00000580986 ABRACLQ9P1F3 81 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 DNAJB11Q9UBS4 358 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 MIOXQ9UGB7 285 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 GLS2Q9UI32 602 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 ETV7Q9Y603 341 aa8.7□□□□□ -1.02
CCDC47-203ENST00000580986 IGHV4-30-2A0A087WSY4 118 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 DPPA5A6NC42 116 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 F8VVB4 439 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 F8VWA3 439 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 WNT9BO14905 357 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 SCGNO76038 276 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 HEXAP06865 529 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 PSG2P11465 335 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 NPY4RP50391 375 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 RORCP51449 518 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 PAX5Q02548 391 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 MXD1Q05195 221 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 LOXL1Q08397 574 aaPredicted RBP8.69□□□□□ -1.02
CCDC47-203ENST00000580986 SLC22A6Q4U2R8 563 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 SPNS3Q6ZMD2 512 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 ZNF788Q6ZQV5 615 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 SLC36A1Q7Z2H8 476 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 ZNF561Q8N587 486 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 NDNFQ8TB73 568 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 DYNC2LI1Q8TCX1 351 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 AP3S1Q92572 193 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 RAB39BQ96DA2 213 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 MED30Q96HR3 178 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 Q96M66 194 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 DMRTB1Q96MA1 342 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 CMTM3Q96MX0 182 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 TMEM246Q9BRR3 403 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 TMEM59Q9BXS4 323 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 FAM234AQ9H0X4 552 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 SPACA1Q9HBV2 294 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 TREM2Q9NZC2 230 aa8.69□□□□□ -1.02
CCDC47-203ENST00000580986 SETXQ7Z333 2677 aaKnown RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 IGKV1D-17A0A075B6S4 117 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 A6NHS1 94 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 NKX6-3A6NJ46 265 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 CEACAM18A8MTB9 384 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 A8MXK9 166 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 SH2D1BO14796 132 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 SIGLEC5O15389 551 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 IGHV2-5P01817 119 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 CSN2P05814 226 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 GLAP06280 429 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 CHRM2P08172 466 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 CLEC2LP0C7M8 214 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 MGMTP16455 207 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 ZNF182P17025 639 aaPredicted RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 PRKACAP17612 351 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 SERPINA2P20848 420 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 USF1P22415 310 aaPredicted RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 CD80P33681 288 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 SOX6P35712 828 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 TGFBR1P36897 503 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 KCNJ3P48549 501 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 RPS27AP62979 156 aaKnown RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 IL13RA1P78552 427 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 RELBQ01201 579 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 HNRNPA0Q13151 305 aaKnown RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 UNC119Q13432 240 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 SPCS2Q15005 226 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 CARTPTQ16568 116 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 C2orf76Q3KRA6 126 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 FAM201AQ5SY85 155 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 NLRC3Q7RTR2 1065 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 FAM89BQ8N5H3 189 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 OR51D1Q8NGF3 324 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 C1orf159Q96HA4 380 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 ZNF488Q96MN9 340 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 GAL3ST1Q99999 423 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 NUDT16L1Q9BRJ7 211 aaKnown RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 URM1Q9BTM9 101 aaKnown RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 BARHL1Q9BZE3 327 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 ZNF665Q9H7R5 613 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 ELL3Q9HB65 397 aaPredicted RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 PATZ1Q9HBE1 687 aaKnown RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 RCC2Q9P258 522 aaKnown RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 DAPK2Q9UIK4 370 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 RAB22AQ9UL26 194 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 SPATA2Q9UM82 520 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 ING4Q9UNL4 249 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 ST3GAL6Q9Y274 331 aa8.68□□□□□ -1.02
CCDC47-203ENST00000580986 POLR3KQ9Y2Y1 108 aaPredicted RBP8.68□□□□□ -1.02
CCDC47-203ENST00000580986 A0A0A6YYH2 397 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 CCDC160A6NGH7 325 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 A6NJ64 397 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 RFPL4AA6NLU0 287 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 RFPL4AL1F8VTS6 287 aa8.67□□□□□ -1.02
CCDC47-203ENST00000580986 ZNF737O75373 536 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms