RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 UBE2J1Q9Y385 318 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 ORC6Q9Y5N6 252 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 MEGF11A6BM72 1044 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 F8VVB4 439 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 F8VWA3 439 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 HAND1O96004 215 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 OPN1MWP04001 364 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 CSF1P09603 554 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 OPN1MW2P0DN77 364 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 OPN1MW3P0DN78 364 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 ATF1P18846 271 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 KIR3DL2P43630 455 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 CEBPDP49716 269 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 ALDH3A2P51648 485 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 PRB3Q04118 309 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 PDZK1IP1Q13113 114 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 OR52W1Q6IF63 320 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 C16orf82Q7Z2V1 217 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 RTN4RL2Q86UN3 420 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 FAM58AQ8N1B3 248 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 CHST4Q8NCG5 386 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 OR4M1Q8NGD0 313 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 TRMT10AQ8TBZ6 339 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 WIPF2Q8TF74 440 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 TBX5Q99593 518 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 COMMD4Q9H0A8 199 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 RIBC2Q9H4K1 309 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 NCOR1P1Q9H4R4 102 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 FRRS1LQ9P0K9 344 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 GNG8Q9UK08 70 aa11.72□□□□□ -0.53
SMARCE1-216ENST00000580419 IGKV1-9A0A0C4DH69 117 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 A0A0G2JK05 382 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 TMEM82A0PJX8 343 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 A6NDX4 124 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 A6NIN4 97 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 FAM90A22PA8MWA6 464 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 CD34P28906 385 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 BMXP51813 675 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 MTCP1P56278 107 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 PAX5Q02548 391 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 KPRPQ5T749 579 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 TCF23Q7RTU1 214 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 EMG1Q92979 244 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 SLAMF9Q96A28 289 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 CREB3L1Q96BA8 519 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 ADAT3Q96EY9 351 aaPredicted RBP11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 OPALINQ96PE5 141 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 HMG20AQ9NP66 347 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 MRPS18AQ9NVS2 196 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 TAS2R3Q9NYW6 316 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 PCDHGB5Q9Y5G0 923 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 SESN1Q9Y6P5 492 aa11.71□□□□□ -0.53
SMARCE1-216ENST00000580419 DAPL1A0PJW8 107 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 OR4C45A6NMZ5 311 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 SH2D1BO14796 132 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 CHST1O43916 411 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 ENTPD6O75354 484 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 KDM4BO94953 1096 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 TSPAN15O95858 294 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 ALDOBP05062 364 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 ARG1P05089 322 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 GABRB1P18505 474 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 EDDM3BP56851 147 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 OR12D2P58182 307 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 EMX1Q04741 257 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 IL18R1Q13478 541 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 GALEQ14376 348 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 TP53I3Q53FA7 332 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 HEPN1Q6WQI6 88 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 PARP16Q8N5Y8 322 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 RNFT2Q96EX2 444 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 Q96MT0 163 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 WNT10AQ9GZT5 417 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 TMEM133Q9H2Q1 129 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 GAL3ST2Q9H3Q3 398 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 ABCB10Q9NRK6 738 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 SERTAD4Q9NUC0 356 aa11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-216ENST00000580419 A0A087X0M5 115 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 A0A1B0GX30 115 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 TMEM212A6NML5 194 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 PSPNO60542 156 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 IGHA1P01876 353 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 HTR1AP08908 422 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 DBTP11182 482 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 ZNF20P17024 532 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 COX7A1P24310 79 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 P2RX3P56373 397 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 BDH1Q02338 343 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 GRK1Q15835 563 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 ODF4Q2M2E3 257 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 ZNF782Q6ZMW2 699 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 LHFPL4Q7Z7J7 247 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 OR52N4Q8NGI2 321 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 FGGYQ96C11 551 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 PELI1Q96FA3 418 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 CPNE2Q96FN4 548 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 JAM3Q9BX67 310 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms