RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	FAM90A14P	P0C7W9	464 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	FAM90A24P	P0C7X0	464 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	TROVE2	P10155	538 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	KRT4	P19013	534 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	PPIB	P23284	216 aa	Known RBP	4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR1E2	P47887	323 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	ZNF45	Q02386	682 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	PRDX4	Q13162	271 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	KRR1	Q13601	381 aa	Known RBP	4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	C19orf54	Q5BKX5	351 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	FAM76B	Q5HYJ3	339 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	SLC16A9	Q7RTY1	509 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	MAVS	Q7Z434	540 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	TIGD4	Q8IY51	512 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	ASCC1	Q8N9N2	400 aa	Known RBP	4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	RASSF5	Q8WWW0	418 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR5P3	Q8WZ94	311 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	LZIC	Q8WZA0	190 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	PIGC	Q92535	297 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	SPSB4	Q96A44	273 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	RPE	Q96AT9	228 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	REEP6	Q96HR9	211 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	POLR2J2	Q9GZM3	115 aa	Known RBP	4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	POLR2J3	Q9H1A7	115 aa	Known RBP	4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	TMEM38A	Q9H6F2	299 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	PLEKHA1	Q9HB21	404 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	AIG1	Q9NVV5	245 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR14J1	Q9UGF5	321 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	RIMS3	Q9UJD0	308 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	RHBDD3	Q9Y3P4	386 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	ADAM18	Q9Y3Q7	739 aa		4.54	□□□□□ -1.68
KPNB1-209	ENST00000580158	UBR4	Q5T4S7	5183 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	HMX3	A6NHT5	357 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	FAM183A	A6NL82	134 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	EFCAB9	A8MZ26	197 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	EVPLL	A8MZ36	301 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158		K7N7A8	449 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	RTL8C	O15255	209 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	RGS11	O94810	467 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	IGKV1D-33	P01593	117 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	IGKV1-33	P01594	117 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	IGLV1-47	P01700	117 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	RBMY1C	P0DJD4	496 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	SLC2A1	P11166	492 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	DCTD	P32321	178 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	IFNA8	P32881	189 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	GPR4	P46093	362 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	GPM6A	P51674	278 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	PRKX	P51817	358 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	CD81	P60033	236 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	GNG11	P61952	73 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	CFHR3	Q02985	330 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	EIF2B1	Q14232	305 aa	Known RBP	4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	RBM39	Q14498	530 aa	Known RBP	4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	HLA-DRB5	Q30154	266 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	LYG2	Q86SG7	212 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	TRAPPC6B	Q86SZ2	158 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	ADCK1	Q86TW2	530 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	TGIF2LX	Q8IUE1	241 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	KIRREL3	Q8IZU9	778 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	GVQW1	Q8N7I0	195 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	STPG3	Q8N7X2	389 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR52L1	Q8NGH7	329 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR4D11	Q8NGI4	311 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR56B4	Q8NH76	319 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	MYOZ3	Q8TDC0	251 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	C2CD4C	Q8TF44	421 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	IFT81	Q8WYA0	676 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	TOMM40L	Q969M1	308 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	KCTD7	Q96MP8	289 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	OR8B4	Q96RC9	309 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	RASL11B	Q9BPW5	248 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	OVOL2	Q9BRP0	275 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	COPS4	Q9BT78	406 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	PARD6B	Q9BYG5	372 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	IKZF5	Q9H5V7	419 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	SRD5A3	Q9H8P0	318 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	PNRC2	Q9NPJ4	139 aa	Known RBP	4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	SLC2A8	Q9NY64	477 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	AASS	Q9UDR5	926 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	CYB5R1	Q9UHQ9	305 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	LINC00312	Q9Y6C7	94 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	VPS13D	Q5THJ4	4388 aa		4.53	□□□□□ -1.68
KPNB1-209	ENST00000580158	AGRN	O00468	2067 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	IGHV4OR15-8	A0A075B7B6	117 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158		A0A087WW49	117 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	EPM2A	B3EWF7	344 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	ZNF732	B4DXR9	585 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	SOCS2	O14508	198 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	NXPH2	O95156	264 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	HSPB1	P04792	205 aa	Known RBP	4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	CD1A	P06126	327 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	OTX1	P32242	354 aa	Predicted RBP	4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	BMI1	P35226	326 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	RPL14	P50914	215 aa	Known RBP	4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	RAB9A	P51151	201 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	POLR2J	P52435	117 aa	Known RBP	4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	GNG3	P63215	75 aa		4.52	□□□□□ -1.69
KPNB1-209	ENST00000580158	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.52	□□□□□ -1.69

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