RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 ERGIC1Q969X5 290 aa11.98□□□□□ -0.49
TRAPPC8-207ENST00000580104 HEATR5BQ9P2D3 2071 aa11.98□□□□□ -0.49
TRAPPC8-207ENST00000580104 MPV17LQ2QL34 196 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 PIGYQ3MUY2 71 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 DCAF12Q5T6F0 453 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 SLC26A1Q9H2B4 701 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 PARP11Q9NR21 331 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 POMT1Q9Y6A1 747 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 MTCH2Q9Y6C9 303 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 IGLV1-36A0A0B4J1U3 117 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 PDCD6O75340 191 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 MDKP21741 143 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 ZNF154Q13106 437 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 FAM103A1Q9BTL3 118 aaKnown RBP11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 YBX2Q9Y2T7 364 aaKnown RBP11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 SNCAP37840 140 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 DLK1P80370 383 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 NAAAQ02083 359 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 ZNF574Q6ZN55 896 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 ZNF721Q8TF20 911 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 NTNG2Q96CW9 530 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 SNX22Q96L94 193 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 CCDC74BQ96LY2 380 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 RYDENQ9NUL5 291 aaKnown RBP11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 GPR132Q9UNW8 380 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 TRBV23-1A0A0A0MS06 115 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 LOC101059948A0A1B0GTJ6 334 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 A0A1W2PQD3 144 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 PRR32B1ATL7 298 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 DXOO77932 396 aaKnown RBP11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 ENDOGQ14249 297 aaKnown RBP11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 LIAT1Q6ZQX7 453 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 TMEM18Q96B42 140 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 HIPK2Q9H2X6 1198 aa11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 ZNF646O15015 1829 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC8-207ENST00000580104 H3BQ15 152 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 ROM1Q03395 351 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 ZNF90Q03938 601 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 CLN3Q13286 438 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 PRAMEF5Q5TYX0 476 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 PRAMEF6Q5VXH4 476 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 THOC3Q96J01 351 aaKnown RBP11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 NPTNQ9Y639 398 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 NKX2-6A6NCS4 301 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 OR8U8P0C7N1 319 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 P2RY4P51582 365 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 HLA-DRB3P79483 266 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 SHISA5Q8N114 240 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 OR11L1Q8NGX0 322 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 OR6X1Q8NH79 312 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 SLC25A28Q96A46 364 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 TXN2Q99757 166 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 CACNG5Q9UF02 275 aa11.96□□□□□ -0.49
TRAPPC8-207ENST00000580104 MSGN1A6NI15 193 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 CHST1O43916 411 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 EIF3GO75821 320 aaKnown RBP eCLIP11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 FSTP19883 344 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 CCL7P80098 99 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 SURF2Q15527 256 aaPredicted RBP11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 ZNF383Q8NA42 475 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 UCN2Q96RP3 112 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 DVL1O14640 695 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 IRF2P14316 349 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 FHITP49789 147 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 TBC1D26Q86UD7 250 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 SLC22A18ASQ8N1D0 253 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 ZNF439Q8NDP4 499 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 C5orf66Q9H5L9 145 aa11.96□□□□□ -0.5
TRAPPC8-207ENST00000580104 CBR3O75828 277 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 EWSR1Q01844 656 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 RAB35Q15286 201 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 AQP3Q92482 292 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 PTX4Q96A99 478 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 CEP250Q9BV73 2442 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 J3QRE1 110 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 ZNHIT1O43257 154 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 GALNSP34059 522 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 ERVS71-1P61550 626 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 RUNX1Q01196 453 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 GUSBP11Q6P575 273 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 POC1BQ8TC44 478 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 SLC25A22Q9H936 323 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 UCK1Q9HA47 277 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 MAP1LC3B2A6NCE7 125 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 DNASE2O00115 360 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 AQP7O14520 342 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 PGA3P0DJD8 388 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 FGF7P21781 194 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 SULT1A2P50226 295 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 MFRPQ9BY79 579 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 MAP1LC3BQ9GZQ8 125 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 LIN7CQ9NUP9 197 aaKnown RBP11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 EP400Q96L91 3159 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 TRAV14DV4A0A0A6YYC5 116 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 ACTL6AO96019 429 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 COX5AP20674 150 aa11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 DSCR4P56555 118 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC8-207ENST00000580104 TRIM61Q5EBN2 209 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms