RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 A0A1W2PRM7 423 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 OR5B21A6NL26 309 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 PIN1P1O15428 100 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 ISG15P05161 165 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 MYL12AP19105 171 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 KIR2DS4P43632 304 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 MAP2K4P45985 399 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 GABRA2P47869 451 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 EFNB2P52799 333 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 CAPZA1P52907 286 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 GBX2P52951 348 aaPredicted RBP10.91□□□□□ -0.66
TRAF4-214ENST00000580073 LGALS4P56470 323 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 GMFBP60983 142 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 GNG3P63215 75 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 CDK5R1Q15078 307 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 SMIM21Q3B7S5 101 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 FAM76BQ5HYJ3 339 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 RBM48Q5RL73 367 aaKnown RBP10.91□□□□□ -0.66
TRAF4-214ENST00000580073 SLC35E4Q6ICL7 350 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 RNF144BQ7Z419 303 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 COMMD2Q86X83 199 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 FAM185AQ8N0U4 392 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 FGFRL1Q8N441 504 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 TMEM185AQ8NFB2 350 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 ZNF671Q8TAW3 534 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 RPL3LQ92901 407 aaKnown RBP10.91□□□□□ -0.66
TRAF4-214ENST00000580073 TNFRSF14Q92956 283 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 ADAT3Q96EY9 351 aaPredicted RBP10.91□□□□□ -0.66
TRAF4-214ENST00000580073 RNF170Q96K19 258 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 HEXA-AS1Q9H8Q6 139 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 GPR173Q9NS66 373 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 SCN3BQ9NY72 215 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 TPRKBQ9Y3C4 175 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 LRRC42Q9Y546 428 aa10.91□□□□□ -0.66
TRAF4-214ENST00000580073 AKR7A2O43488 359 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 SYT7O43581 403 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 SELLP14151 372 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 ATP6V1B1P15313 513 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 RPS11P62280 158 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRAF4-214ENST00000580073 RIPPLY1Q0D2K3 151 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 UBE2V2Q15819 145 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 DGUOKQ16854 277 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 BEAN1Q3B7T3 259 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 CEP78Q5JTW2 689 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 DMKNQ6E0U4 476 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-214ENST00000580073 RPL22L1Q6P5R6 122 aaKnown RBP10.9□□□□□ -0.66
TRAF4-214ENST00000580073 TMPRSS11AQ6ZMR5 421 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 MOB3CQ70IA8 216 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 KLHDC1Q8N7A1 406 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 OR5T2Q8NGG2 359 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 OR13C5Q8NGS8 318 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 MYDGFQ969H8 173 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 FOXRED1Q96CU9 486 aaPredicted RBP10.9□□□□□ -0.66
TRAF4-214ENST00000580073 MRPL48Q96GC5 212 aaKnown RBP10.9□□□□□ -0.66
TRAF4-214ENST00000580073 PGLYRP3Q96LB9 341 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 MEGF9Q9H1U4 602 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 RASL12Q9NYN1 266 aa10.9□□□□□ -0.66
TRAF4-214ENST00000580073 IGKV1-9A0A0C4DH69 117 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 TRBV2A0A0J9YWF9 115 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 RGS10O43665 173 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 ALDOBP05062 364 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 UBCP0CG48 685 aaKnown RBP10.89□□□□□ -0.67
TRAF4-214ENST00000580073 GPM6AP51674 278 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 WNT4P56705 351 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 CCDC58Q4VC31 144 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 KPRPQ5T749 579 aaPredicted RBP10.89□□□□□ -0.67
TRAF4-214ENST00000580073 ZBTB37Q5TC79 503 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 TMEM244Q5VVB8 128 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 CRIP3Q6Q6R5 217 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 PRSS48Q7RTY5 328 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 ZNF561Q8N587 486 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 ZNF676Q8N7Q3 588 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 OR5AK2Q8NH90 309 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 CFHR4Q92496 578 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 FGGYQ96C11 551 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 ORAI1Q96D31 301 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 SEH1LQ96EE3 360 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 WDR13Q9H1Z4 485 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 ENPP5Q9UJA9 477 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 PITPNC1Q9UKF7 332 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 POLDIP2Q9Y2S7 368 aa10.89□□□□□ -0.67
TRAF4-214ENST00000580073 IGKV1-27A0A075B6S5 117 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 PNMA8CA0A1B0GUJ8 204 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 DHRS7CA6NNS2 312 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 FBXO24O75426 580 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 MTRF1O75570 445 aaKnown RBP10.88□□□□□ -0.67
TRAF4-214ENST00000580073 ALX3O95076 343 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 NRASP01111 189 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 ERVFRD-1P60508 538 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 MRPL28Q13084 256 aaKnown RBP10.88□□□□□ -0.67
TRAF4-214ENST00000580073 CEACAM21Q3KPI0 293 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 CLVS2Q5SYC1 327 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 SAMD5Q5TGI4 173 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 PNKDQ8N490 385 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 OR4F17Q8NGA8 305 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 GHSRQ92847 366 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 SMIM19Q96E16 107 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 SDSLQ96GA7 329 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 OR4F4Q96R69 305 aa10.88□□□□□ -0.67
TRAF4-214ENST00000580073 Q9H521 79 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms